KEGG   Thermosulfidibacter takaii: TST_0519
Entry
TST_0519          CDS       T04192                                 
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ttk  Thermosulfidibacter takaii
Brite
KEGG Orthology (KO) [BR:ttk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ttk03016]
    TST_0519 (ligT)
Enzymes [BR:ttk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     TST_0519 (ligT)
Transfer RNA biogenesis [BR:ttk03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    TST_0519 (ligT)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: BAT71325
UniProt: A0A0S3QSM1
Position
532367..532936
AA seq 189 aa
MKIRAFVAVELSDEIKNAVSKDAEELKKVGVKGSYPRKEAYHITLKFLGNIDENKVDRIL
RSLQEKLQGVSPFEIEVADRGAFPNIYNPRVLWCGITKGSEQLRDLNNRVERALEPLGFK
KEEREFHPHVTLCRVKRINSQTKRYIQQFASKKEHYGKCKISRVVLFKSILRPEGAKYEE
LGSIELGGD
NT seq 570 nt   +upstreamnt  +downstreamnt
ttgaaaattagggcctttgtggctgtggaactttcggatgaaattaagaacgcagtatct
aaagacgctgaggagctaaaaaaggtcggagttaaagggtcctatccgaggaaggaagca
tatcatatcaccctgaaatttctgggaaatatagatgaaaataaagtggatcgaatttta
agatctttgcaggaaaaactacagggtgttagtccctttgagatagaggtggccgatcga
ggggctttcccaaacatttataatccaagggtgttgtggtgtggaataactaaaggttct
gagcaattaagggatctcaataatagagttgagagagctttggaaccgttgggcttcaaa
aaagaggagagagaattccaccctcatgttaccctgtgcagggttaaacgcattaatagc
cagacaaagaggtatatccaacaattcgccagtaaaaaggagcactacgggaagtgtaaa
attagcagagtggtgctgttcaagagcattttaagacctgaaggggctaaatatgaagaa
ttgggatctattgaattgggaggggattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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