KEGG   Thermus thermophilus JL-18: TtJL18_0607
Entry
TtJL18_0607       CDS       T02009                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
ttl  Thermus thermophilus JL-18
Pathway
ttl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TtJL18_0607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttl03400]
    TtJL18_0607
DNA repair and recombination proteins [BR:ttl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TtJL18_0607
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      TtJL18_0607
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 AAA_16 AAA_22 nSTAND1 AAA_25 nSTAND3 AAA_23 AAA_18 ATPase AAA_14 RsgA_GTPase NACHT AAA_33 NTPase_1 APS_kinase DnaJ_CXXCXGXG AAA_28 RNA12 cobW RNA_helicase SLFN-g3_helicase Cytidylate_kin AAA_15 DUF2752
Other DBs
NCBI-ProteinID: AFH38512
UniProt: H9ZQA2
Position
complement(536655..539513)
AA seq 952 aa
MDRIVIRGAREHNLKNISLELPRGKFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSSY
ARQFLGVMDKPEVESIEGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLFARVGQAFC
PECGRPIEKQSASEITDRLLRRPPGTRAILMAPLVRGRKGEYRKLFQQLLKEGYARVRVD
GVLYLLEEAQGLSLEKYEKHDIDLVIDRVVLKEEERPRIAEAVELALLRGEGLLRVLYPD
TGEEELFSEKFACPEHGSVLEELEPRIFSFNSPYGACPACSGLGYRQEFDPELVVNPELS
LAEGAILPWSRGRDTGRSYLWDRLRALAEHLGFDLKTPFKDLPEEAKRAVLYGLPEPFEV
VFRRGGKETFRVEVRYEGVIPWLEKRYQESDSEGVREALEGFMSLRPCPACGGTRYKREV
LSVKVAGRNIAEVSALPVREALAFFQGLEKTLSPFQAQIARPILREIVERLGFLVDVGLD
YLTLDRAANTLSGGEAQRIRLATQVGSGLTGVLYVLDEPSIGLHPRDNQRLIRTLKRLRD
LGNTLIVVEHDEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDILKSPQSLTGAYLRGEK
RIPVPEARRKGNGKWLVLKGARAHNLKNVTLRIPLGRFVAITGPSGSGKSTLVHDVLYAA
LAQRLMRAKTTPGPYEALEGVEHLDKVIEIDQSPIGRTPRSNPATYTGVFDEIRDLFAKT
PEARKRGYGPGRFSFNVKGGRCEACGGDGTVKIEMLFLPDLYVPCEVCKGKRYNKETLEV
KLRGKSIADVLDMTVEEALDFFQNVPSIARKLQLMVDVGLGYMKLGQPSPTLSGGEAQRI
KLATELGRKATGRTLYILDEPTTGLHFDDVAKLLSVLHRLVDAGNTVVVIEHNLDVVKTA
DWVIDLGPEGGDRGGEIVAEGTPEEVALTGSPTGAFLARIPEIAARIGVAAD
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggaccgcatcgtcatccggggcgctcgggagcacaacctgaagaacatcagcctggag
cttccccggggcaagttcatcgtcatcaccggggtttccggctcggggaaaagcaccttg
gcctttgacaccatctacgccgaggggcagaggcgctacgtggaaagcctttccagctac
gcccggcagtttctgggcgtgatggacaagcccgaggtggagagcattgaggggctttcc
ccggccatctccattgaccagaagaccacgagccacaacccccgctccaccgtgggcacc
gtcacggagatccacgactacctccgcctcctcttcgcccgcgtggggcaggccttctgc
cccgagtgcggccgtcccattgagaagcagtcggcgagcgagatcaccgaccgcctcctc
aggcgtcctcccggcacccgggctatccttatggcccccttggtgcgggggagaaaagga
gagtacaggaagctctttcagcagctcctgaaggaaggctacgcccgggtgcgggtggac
ggggtcctctacctcctggaggaggcccaaggcctcagcctggagaagtacgagaagcac
gacattgacctggtgattgaccgggtggtcctgaaggaggaggagcgcccccgcatcgcc
gaggcggtggagctcgccctgcttcggggggaaggccttcttagggttctctacccggac
accggggaagaggagctcttctcggagaagttcgcctgccccgagcacggctcggtcctg
gaggagctggagccccgcatcttctccttcaacagcccctacggggcctgccccgcctgc
tccggcctcggctaccgccaggagtttgaccccgagctcgtggtgaaccccgagctctcc
ctggccgagggggccatcctcccctggtcccgggggcgggacacggggaggagctacctc
tgggaccgtcttagggccctggccgagcacctgggctttgacctcaagacccccttcaag
gacctgccggaggaggcgaagcgcgccgtcctctacggccttcccgaaccctttgaggtg
gtcttccgccggggcggcaaggaaaccttccgggtggaggtgcggtacgagggggtgatc
ccctggctggagaagcgctaccaggagtccgactccgagggggtgcgggaggccctggag
ggcttcatgtccttaaggccgtgccccgcctgcgggggcacccggtacaagcgggaggtc
ctctcggtgaaggtggcggggaggaacatcgccgaggtctccgccctccccgtgcgggag
gccttggcgttcttccagggcctggagaagaccctttcccccttccaggcccagatcgcc
cggcccatcctcagggagatcgtggagcggctcggcttcctggtggacgtgggcctggac
tacctcaccctggaccgggcggccaacaccctctccggaggcgaggcccagaggatccgg
ctcgcgacccaggtgggctcgggcctcaccggggtcctctacgtgctggacgagcccagc
atcggcctccacccccgggacaaccaacgcctcatccgcaccctcaaaaggctccgcgac
ctgggcaacaccctcatcgtggtggaacacgacgaggagaccatgcgggccgccgactgg
atcgtggacatgggtccgggggcggggatccacggaggggaggtggtggcccagggcacc
ctggaggacatcctcaaaagcccgcaaagcctcaccggggcctacctcaggggggagaag
aggatccccgtgcccgaggcgaggcgcaaggggaacggcaagtggctcgtcctcaagggg
gcgcgggcgcacaacctgaagaacgtcaccttgaggatccccctgggccgcttcgtggcc
atcaccggcccctcgggctcggggaagagcaccctcgtccacgacgtcctctacgccgcc
ctggcccagcggctcatgcgggccaagacgacccccgggccctacgaggccctggagggg
gtggagcacctggacaaggtcatcgagattgaccagtcccccatcggccgcaccccccgg
tccaaccccgccacctacaccggggtctttgacgagatccgcgacctcttcgccaagacc
ccggaggccaggaagcgggggtacggcccaggccgcttctccttcaacgtcaagggcggg
cggtgcgaggcctgcggcggggacgggacggtgaagattgagatgctcttcctccccgac
ctctacgtcccctgcgaggtctgcaagggcaagcgctacaacaaggagaccctggaggtc
aagctcagggggaagagcatcgccgacgttctggacatgacggtggaggaggccctggac
ttcttccagaacgtcccctccatcgcccggaagctccagctcatggtggacgtgggcctg
gggtacatgaagctgggccagccctcccccaccctctccgggggggaggcccagaggatc
aagctcgccacggagctcggccgcaaggccacgggccgcaccctctacatcctggacgag
cccaccacgggcctgcactttgacgatgtggcgaagctcctctcggtcctccaccggctg
gtggacgcgggcaacaccgtggtggtcattgagcacaacctggacgtggtgaagaccgcg
gactgggtgattgacctgggccccgagggcggggaccggggcggggagatcgtggccgag
ggcacccccgaggaggtggccctcacggggagccccacgggggccttcctcgcccggatc
cccgagatcgccgcccggatcggagtggcggcggactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (37)   

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