KEGG   Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_1371
Entry
Tthe_1371         CDS       T01299                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ttm  Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm02024  Quorum sensing
ttm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ttm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tthe_1371
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tthe_1371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttm03019]
    Tthe_1371
   03036 Chromosome and associated proteins [BR:ttm03036]
    Tthe_1371
Messenger RNA biogenesis [BR:ttm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Tthe_1371
Chromosome and associated proteins [BR:ttm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Tthe_1371
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ADL68885
UniProt: D9TTB9
Position
1377587..1377841
AA seq 84 aa
MNQKAAINLQDIFLNQVRKEHIAVTVYLINGFQLKGIVKGFDNFTVVLETDNKQQQLIYK
HAVSTITPLKPVIFTTTEKDEKQQ
NT seq 255 nt   +upstreamnt  +downstreamnt
atgaatcaaaaggcagctatcaatttacaggacatatttttaaaccaggtaagaaaggaa
catatcgctgtaactgtgtacttgattaatggctttcagctaaaaggcatagttaaaggg
tttgataattttaccgttgttttagaaacagacaataaacaacaacaacttatatataaa
catgctgtttctacaataacgcctttgaaacctgtgatttttacaacgacagaaaaagat
gaaaaacaacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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