KEGG   Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_1403
Entry
Tthe_1403         CDS       T01299                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ttm  Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ttm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tthe_1403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttm03019]
    Tthe_1403
   03016 Transfer RNA biogenesis [BR:ttm03016]
    Tthe_1403
Enzymes [BR:ttm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Tthe_1403
Messenger RNA biogenesis [BR:ttm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Tthe_1403
Transfer RNA biogenesis [BR:ttm03016]
 Prokaryotic type
  tRNA degradation factors
   Tthe_1403
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 DUF1773 SPATA25 Amidoligase_2 DUF2201_N
Other DBs
NCBI-ProteinID: ADL68917
UniProt: D9TLR8
Position
complement(1410375..1412477)
AA seq 700 aa
MERNFELDLAGKKLIVQTGKLAQLANGSALVRYGDTVVLVTACASKEPREGVDFFPLSVD
YEERLYSVGKIPGGFIKREGKPTEKAILTSRLIDRPIRPLFPHGYRNDVQVIATVLSVDP
DVQPEIVAMIGSSVALSISDIPFNGPTGSVSVALVDGKFIINPDLATREKSDLHLTVSGT
KDAIMMVEAGANEVPEEVMLDAIMYAHEYIKKIVDFIEGIVKEVGLPKAEVTIHEIDSNL
ERLVREFATEKIYNALRTEEKKERNDNIDKVEEEVLEHFKDEYPDNLADIDEVLYTITKE
QMRKMITEEKIRVDGRGLDDIRPITCDIGVLPRTHGSAVFTRGQTQVMTVATLGPLGDIQ
ILDGLGDEESKRYMHHYNFPPFSVGETRPLRGPGRREIGHGALAERALEPMIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALMDAGVPIKAPVAGVAMGLIKEGETVSILTDIQG
IEDFLGDMDFKVAGTEKGITAIQMDIKIAGIDRDILSAALEKARKGRLFILNKMLETIKE
PRKELSPYAPRIISLNVDPEKIRDIIGAGGKTINKIIADTGVKIDIEDDGRVFISSTDLK
AGEKAKMIIEAITKDVEVGAIYLGKVTRIASFGAFVEIAPGKEGLVHISKLDKKHVNKVE
DVVNIGDEILVKVTEIDKQGRINLSRKDALPDESKNDKEM
NT seq 2103 nt   +upstreamnt  +downstreamnt
atggaaagaaatttcgaacttgaccttgctggaaaaaaattaatagttcaaactggaaag
cttgcgcaactagctaatggtagtgcacttgttagatatggtgatacagtggtattagta
acagcttgcgcttcaaaagagccgagagaaggcgttgatttttttccgttaagcgttgat
tatgaagagaggctgtattctgtgggtaaaataccaggtggttttattaaacgagaaggt
aagcctacagaaaaagctattttaacatcaagattgatagataggcctataaggccattg
tttcctcatggttatagaaacgacgtacaagttattgctactgttttgtctgttgatcct
gatgtacagccagagattgtagctatgatagggtcttcagttgcattatctatatcagat
attccatttaatggccctacgggttccgtgtcagtagcgctagtagatggaaaatttata
attaatcctgatttggctacaagggaaaaaagcgatctccatttgactgtttctggtaca
aaagatgctattatgatggttgaagcaggtgctaatgaagttccagaagaagtaatgtta
gatgcaattatgtatgctcatgagtacataaagaaaatagtagatttcattgagggaatt
gtaaaagaagtggggcttcctaaagcagaagtaacaatacatgaaatagatagcaattta
gaacgccttgtcagagaatttgcaacagaaaaaatatataatgcacttagaacagaggaa
aaaaaggaaagaaatgataacatagacaaagttgaagaagaggtattggagcattttaaa
gatgaatatccagataaccttgctgatattgatgaggttctatatacaattacaaaagag
caaatgcgaaaaatgatcactgaagaaaaaataagagtagatggaagaggacttgatgat
atcaggcctataacttgtgatataggagttttgcctaggacacatggttcagcagtcttt
actcgtggacaaacacaggtgatgacagtcgcaacattaggaccgcttggagatatacaa
atattagatggattaggtgatgaagaatctaagcgatatatgcatcattataattttcct
ccttttagtgttggtgaaacaagaccattaagaggtcctggaagaagggaaattggacat
ggtgcgttagcagagagagcactagagcctatgataccatccgaagaagagtttccatat
acaataagattggtatcggaggtactaagttcaaacggctctacttctcaagcaagtgta
tgtggaagcacactggctcttatggatgctggtgtcccgattaaagcgcctgttgcaggt
gttgctatgggactaattaaagaaggtgaaacggtatcgattctgacagacatacaagga
atagaagattttctcggtgacatggattttaaagtagctggtactgaaaaaggaataaca
gcaattcaaatggatataaaaattgctggtattgatcgcgacattctatcagcagcacta
gaaaaagcacgaaaaggtagactttttatattgaataaaatgttagaaacaataaaagag
cctagaaaggaattatctccttatgctccaagaataattagcttaaatgtcgaccctgaa
aaaataagggatataattggagctggtggtaaaacaataaataaaataattgctgataca
ggtgtcaaaatagatatagaagatgatggacgagtgtttatatcatctactgatttaaaa
gcaggcgaaaaagcaaaaatgattattgaagctataacaaaagatgtggaagttggtgca
atatatttaggtaaggttactagaattgcttcatttggtgcatttgttgagattgcaccc
ggaaaagaaggcttagtgcatatttcaaaattagataaaaaacatgtaaataaagttgaa
gatgttgtaaacataggagatgaaattttagtaaaagtaactgagattgataaacaagga
cgaataaatttatcaaggaaagatgctttgccagacgaatctaaaaatgacaaggaaatg
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (77)   

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