KEGG   Thermochromatium tepidum: E6P07_02375
Entry
E6P07_02375       CDS       T06573                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ttp  Thermochromatium tepidum
Pathway
ttp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ttp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E6P07_02375 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttp03021]
    E6P07_02375 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ttp03400]
    E6P07_02375 (rpoZ)
Enzymes [BR:ttp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E6P07_02375 (rpoZ)
Transcription machinery [BR:ttp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E6P07_02375 (rpoZ)
DNA repair and recombination proteins [BR:ttp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E6P07_02375 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 WGG
Other DBs
NCBI-ProteinID: QGU31929
UniProt: A0A6I6EAH5
Position
508995..509297
AA seq 100 aa
MARITVEDCLEHVDNRFDLVLLATKRARQLAKGVEPLLPAENDKPTVLALREIAAGKITN
AMIQEAQREMDDMAAALEQALAQEFATRLEDVESDRDVKD
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcccgcatcacggtcgaggattgcctcgaacacgtcgataaccgtttcgatctggtt
ctgctcgccaccaagcgcgcacggcagctggccaagggcgtcgagccgctgctgccggca
gagaacgacaaaccgaccgtcctggccctgcgcgagatcgccgctggcaagatcactaac
gccatgatccaggaggcccagcgcgagatggacgacatggcggcggcactggagcaggca
ctggctcaggaattcgccaccaggctcgaggacgtggaatccgacagggatgtcaaggac
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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