KEGG   Thermus thermophilus SG0.5JP17-16: Ththe16_1895
Entry
Ththe16_1895      CDS       T01867                                 
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
tts  Thermus thermophilus SG0.5JP17-16
Pathway
tts03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tts00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ththe16_1895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tts03400]
    Ththe16_1895
DNA repair and recombination proteins [BR:tts03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ththe16_1895
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Ththe16_1895
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 AAA_22 nSTAND3 HerA_C AAA_7 AAA AAA_19 AAA_25
Other DBs
NCBI-ProteinID: AEG34287
UniProt: F6DFV0
Position
complement(1793962..1795959)
AA seq 665 aa
MTFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVL
APNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDAAINPEIERLR
HSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVEQGATYPREALLERLLELGYER
NEIDLAPGRFRAKGEVLEIFPAYDTEPIRVELWGDEVERIFQVHPVTGERLRELPGFVLF
PATHYLSPEGLEEILREIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPG
VENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLMGMYRGDYARKKTLVDYG
FRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELEHSGRVVEQIIRPTGLLDPLVRVK
PTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFERQ
ALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNA
RGEVWLYADRVSEAMQRAIEETNRRRALQEAYNQEHGITPETVRKEVRAVIRPEGYEEAP
LEADLSGEDLRERIAELELAMWQAAEALDFERAARLRDELRALEARLQGVKTPEPVPGRR
KRKRR
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgaccttccgctaccgggggccaagccccaagggggaccagcccaaggccatcgccggg
ctcgtggaggccttgagggacggggagcgcttcgtcaccctcctcggggccacgggcacg
gggaagacggtgaccatggccaaggtcattgaggccctgggaaggcccgctttggtcctc
gcccccaacaagatcctcgcggcccagcttgcggcggagttcagggagctcttcccggag
aacgccgtggagtacttcatcagctactacgactactaccagcccgaggcctacgtcccg
gggaaggacctctacatagagaaggacgccgccatcaaccccgagattgagcgcctgagg
cactccaccacccgaagcctcctcacgcggcgggacgtgatcgtggtggcctcggtctcc
gccatttacggcctcggggacccccgggagtaccgggcgcggaacctggtggtggaacag
ggggccacctacccccgggaggcccttctggagcgcctcctggagctcggctacgagcgc
aacgagatagacctggccccgggccgcttccgggctaagggggaggtgctggagatcttc
cccgcctacgataccgagcccatccgggtggagctatggggggacgaggtggagcgcatc
ttccaggtgcaccccgtcaccggggagcggcttcgggagcttcccgggtttgtcctcttc
cccgccacccactacctaagcccggaagggctagaggagatcctgagggagattgagaag
gagctctgggagagggtccgctactttgaggaaaggggggaggtcctctacgcccagcgc
ctcaaggagcgcaccctctacgacctggagatgctaagggtcatgggcacctgccccggg
gtggagaactacgcccgctacttcacggggaaggccccgggggagcctccctacaccctc
ctggactacttccccgaggacttcctcgtcttcctggacgagtcccacgtgaccgtgccc
cagctcatggggatgtaccggggggactacgcccgcaagaagaccctggtggactacggc
ttccgcctcccctcggcgttggacaaccgcccccttcgctttgaggagtttttggagagg
gtttcccaggtggtcttcgtctccgccaccccggggccctttgagctagagcattcgggg
cgggtggtggagcagatcatccggcccacggggctattggaccccctggtgcgggtcaag
cccacggagaaccagatcctggacctcatggaggggatacgggaaagggcggcaaggggg
gagcgcaccctggtcacggtcctcacggtgcgcatggccgaggagctcacgagctttttg
gtggagcacgggatccgggcccgctacctccaccacgagctggacgcctttgagcgccag
gccctgatccgggacctaaggcttggccactacgactgcctcgtggggatcaacctcctc
cgggagggcctggacatccccgaggtctccctggtggccatcctggacgccgataaggag
ggcttcctgcgaagcgagcggagcctcatccagaccatcggccgggcggcgaggaacgcc
aggggcgaggtttggctctacgccgaccgggtctccgaggccatgcagagggccatagag
gagacgaaccggagaagggccctccaggaggcctataaccaggagcacggcatcaccccg
gagacggtgcggaaggaggttagggccgtcatccgccccgagggctacgaggaggccccc
ctcgaggccgacctctccggggaggacctgagggagaggatcgccgagctggagcttgcc
atgtggcaggcggcggaggctttggactttgagcgggcggcgaggcttagggatgagctt
cgggccctcgaggcccgcctccagggcgtgaagacccccgagcccgtccccgggcggcgg
aagcggaagcggaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system