KEGG   Thermothielavioides terrestris: THITE_2097043
Entry
THITE_2097043     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K12590  exosome complex component RRP46
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    THITE_2097043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttt03019]
    THITE_2097043
Messenger RNA biogenesis [BR:ttt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     THITE_2097043
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 11521731
NCBI-ProteinID: XP_003656410
JGI: Thite2_2097043
UniProt: G2RE47
Position
5:complement(join(1118224..1118637,1118700..1118857,1118923..1119112))
AA seq 253 aa
MTATTAPEAALGILPRADGSAKYSHAGYTVTGSVNGPIEAQRRDEHAYEAHVDVIVRPAA
GVGGTRERHLESILQSSLSQLILVKDFPRSLIQIVLQVENSPENDYVDTKLVQASLNFSI
MPALLQTAVLALLSAAVPMRATATATAIAVAQQGDHKKTIIDPSPRDIETAHSVHVLAFT
SHDELLLAESEGDFTVRDWDDVYETAKRICCRSARPKEGMAMVLDEDDVGGPDMRHFLQS
TMESKVAADLHWK
NT seq 762 nt   +upstreamnt  +downstreamnt
atgacagcaacgacagcaccggaggccgcgctcgggattctccctcgagcggacgggtct
gccaaatactcgcacgccggatacacggtaacgggctcggtaaacggacctattgaagct
cagcggcgggacgagcatgcatacgaggcacacgtcgatgtgatcgttcgcccggcggca
ggggtgggagggacccgggaacggcatctagagtcgattctgcagtcttctctctcgcag
ctcattctggtcaaggacttcccccgctctctcatccagatcgtgctccaagttgagaac
tctccggagaacgactatgtcgacaccaaacttgtgcaggcgagcctaaatttttccatt
atgccggcgcttcttcagaccgccgtcctggcccttctttcggcggccgtcccgatgagg
gcaacggctaccgccaccgccatcgcggtagcgcagcaaggcgaccacaagaagaccatt
atagatccttccccgagggacatcgaaacggcccattcggtacatgtgctggcgttcacg
tctcacgatgagctgcttcttgctgagagcgagggtgacttcactgtaagggattgggac
gatgtctacgaaaccgccaagaggatctgctgccgctccgcacggccaaaggagggcatg
gcgatggtgctcgacgaagatgatgtcggtgggccggatatgcggcacttccttcaatca
acaatggaatccaaagtggctgcggatctccattggaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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