KEGG   Thermothielavioides terrestris: THITE_2110170
Entry
THITE_2110170     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    THITE_2110170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttt03019]
    THITE_2110170
Messenger RNA biogenesis [BR:ttt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     THITE_2110170
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 11523375
NCBI-ProteinID: XP_003650571
JGI: Thite2_2110170
UniProt: G2QRU1
Position
1:complement(join(7880981..7881161,7881236..7881611,7881680..7881835,7881920..7882274))
AA seq 355 aa
MMPNPHVYGHHQYPQAESAWMHQQPSHQHHAQAAAAAATVAQQQHYNRLATAHNTVGALG
QAHAPDNVLEGSVSEDNRRTLQYIADLLNENTREAALLELSKKREQVPELALILWHSFGV
MTSLLQEIISVYSLLSPSQLTAAASNRVCNALALLQCVASHNETRTLFLNAHIPLYLYPF
LNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPLCLRIMETGSELSKTVA
IFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVAQLVEQQTARLLKHVVRCFLRLSDN
ARAREALRQCLPEPLRDHTFSAVLRDDAATKRCLTQLLINLSENTMEPTAGQLTL
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatgccaaatccgcacgtctacggccaccaccagtatccccaggccgagtcggcctgg
atgcaccagcagccgtcgcaccaacaccacgcccaggccgctgccgctgccgccactgtc
gcccagcagcagcactacaaccggttagccaccgcccacaacaccgtcggcgccctcggc
caggcccatgccccagacaatgtgctcgaggggtccgtgtctgaggacaaccggcggacc
ttgcagtacatcgcagacctgctgaacgagaacacccgtgaggccgcgctgttggagctc
agcaaaaagcgcgagcaggttccggagctggccttgattctgtggcactcatttggtgtc
atgacgtcgctgctgcaagagatcatcagcgtctacagtctcctgagcccgtcgcagctt
actgccgctgcgtcgaaccgagtctgcaatgcgctggccctcctccagtgcgtcgcgtcg
cacaacgagacgcgcacacttttcctgaatgcgcacatcccgctctatctctatcccttc
ctcaacacgacgtccaagtcgcgacctttcgagtacctgcgactgacatcccttggggtg
atcggcgctctggtcaagaacgactcctcggaggtcatcaatttccttctcaccaccgag
atcatcccgctgtgcctgcgcatcatggagacgggttccgaactcagcaaaaccgtggcc
atcttcattgtgcagaagatcctgctcgacgacaacggcctgaactatatctgcgccacc
tacgagcgattctatgcggtgggtacggtcctcagcaacatggtcgcccaactggtggag
cagcagaccgccaggctgctgaagcacgttgtccgatgcttcttacggctcagtgataac
gcccgtgcacgcgaagcgctgaggcaatgcctccccgagccgctccgcgaccacacgttc
tcggccgttctccgcgacgacgcagcgacaaagcgctgcctcactcagctgctcatcaac
ctgtcagagaacacgatggagcctaccgccggccagcttacgctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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