KEGG   Teredinibacter turnerae: TERTU_2742
Entry
TERTU_2742        CDS       T00952                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ttu  Teredinibacter turnerae
Pathway
ttu03030  DNA replication
ttu03430  Mismatch repair
ttu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ttu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TERTU_2742 (dnaX)
   03430 Mismatch repair
    TERTU_2742 (dnaX)
   03440 Homologous recombination
    TERTU_2742 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ttu03032]
    TERTU_2742 (dnaX)
   03400 DNA repair and recombination proteins [BR:ttu03400]
    TERTU_2742 (dnaX)
Enzymes [BR:ttu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TERTU_2742 (dnaX)
DNA replication proteins [BR:ttu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TERTU_2742 (dnaX)
DNA repair and recombination proteins [BR:ttu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TERTU_2742 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_5 AAA_22 AAA_16 AAA_18 AAA_14 AAA_2 AAA_19 AAA_30 PIF1 nSTAND3 TsaE AAA_7 Mg_chelatase T6SS_TssG AAA_24 SKI AAA_28 Rad17 DUF4404 ABC_tran Herpes_Helicase AAA_assoc_2
Other DBs
NCBI-ProteinID: ACR10760
UniProt: C5BMJ1
Position
complement(3025822..3027840)
AA seq 672 aa
MSYQVLARKWRPANFREMVGQEHVLRALINALDHNRLHHAYLFTGTRGVGKTTIARILAK
CLNCDSGVTSTPCGECTSCVEIAEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY
KIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSP
ERIVGHLQNVLEKEAIPSDNAALWSLARAADGSMRDALSLTDQAIAFGSGKVADSDVAAM
LGTIDHQLIQRLIEALIESDGARLLNAVAEFAEHAPDFDAALSDLLTMLHRIAIAQALPE
ALDNSFGDRAQVLDFAARLTPEDVQLFYQTALIGRRDLPLASDSRSGFEMSLLRMLAFRP
QGLVDVPANVLPASVAPASLGATDAPAQENAPAKKSEPELPVPASVAGEPIAAQADAPAP
QQAPEKNNVAPESLREPIAAPGPGSEDYPPWEEAPGTPVDVESLHLSVASDATPLAETTR
PGKSAAASIAAQLREQVKEITGAEGFSAPKRPPADSPAQSISQPQQKQANSQHLGTKVEL
QQLTPDNWVKVFRTANIRGIMQSTAANVVLLGREENHLLFALDESRASLYDSSHAQRLAD
LLSDYFGMPVKVDIQLQSLPPELQTPAQIGEREKRERYENALESLAADPVVQTLQSVFGA
TLNEGSVTFPNE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgagctatcaggttcttgcgcgcaagtggcgacccgctaatttccgcgaaatggtgggc
caggagcacgttctgcgtgcgctgatcaatgcgcttgatcacaaccgattgcaccacgct
tacttgtttacgggtacgcggggcgtcggcaaaaccactattgcccggattctcgcgaaa
tgccttaactgcgatagtggcgttacatctacgccgtgtggcgagtgcacatcctgcgtt
gaaattgctgagggccggtttgtcgacctcatcgaggtggacgcagcatcgcgtaccaaa
gttgaagacacccgggaactactcgacaacgttcagtacgcacccacgcgcgggcgctac
aaaatatacctgatcgacgaagtgcacatgctctccaaccacagtttcaacgcattgttg
aaaacgctggaagagccgcctgagcatgtgaagtttctgttggccaccaccgatccgcag
aaactaccggtaactatcctgtcccgttgtttgcagttcaatctcaaaaatatgagccct
gaacgcatagtggggcacctgcaaaatgtgctggagaaagaggcgattcccagtgacaac
gcggcattgtggtcgctggctcgcgctgcggatggcagtatgcgcgatgcgttaagcctc
accgatcaagccatcgcctttggcagtggtaaagttgccgacagcgatgtggctgcgatg
ctgggcactattgatcaccagcttattcagcggttgattgaagccctgattgaaagcgac
ggcgccagattactcaacgctgtagccgagtttgcagagcacgcgccggacttcgatgca
gcgctcagcgatttgctcacgatgctgcaccgcatcgccattgcccaggcacttcccgaa
gcgctcgacaacagtttcggtgatcgcgcacaagtactcgattttgctgcgcgtctcaca
ccagaggatgtgcaactgttttatcagacggcgttgataggtcggcgtgatttgcccctg
gcctccgacagtcgaagcggctttgaaatgtcgttgttacgcatgttggcgttccgtccg
cagggcttggtagacgttccggctaatgtgctgcccgcgtccgtagcaccagcatcgctc
ggtgctacggacgcgcccgcacaggagaacgcaccggcaaaaaagtctgaacctgagttg
cccgtgcctgcatcagtggcaggcgagccaattgctgcgcaggctgatgctccagctcca
cagcaggcaccagagaagaataatgttgcaccggaatctttgcgcgaaccgattgctgca
cctgggccagggtctgaggattaccctccctgggaagaagcgcctggaacaccggttgac
gtcgagagtttgcatctctctgttgccagcgacgcaacgccattggctgaaaccacgcgg
ccgggtaaatcagcggccgcgagcatcgctgcgcaattgcgtgaacaagttaaggaaatt
accggagccgaggggttctcggcgccgaaacggccgcctgcagattctcccgctcagtcg
atatcacaaccgcaacaaaagcaggcaaatagccagcatttggggacaaaggttgaactt
cagcaattgacccccgataactgggtaaaggtgttccgtaccgcgaacatccgcggcatc
atgcagagcacggccgcgaatgtggtattgctcgggcgcgaagaaaaccacctgctattt
gcgctggatgaatcgcgtgcgagtctgtatgacagctcgcatgcgcaacggctggcggat
ctgttatcggattattttggcatgccggtgaaagtggatattcaactgcaatcgctgccg
cccgaattacaaactccggcgcaaattggcgaacgagaaaaacgagagcgctacgaaaac
gcgcttgaatctttggcggcagatcccgttgtacaaactttacagtcagtatttggggct
acccttaacgaagggtcagtgacgtttcccaacgagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (109)   

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