KEGG T00952: TERTU

Teredinibacter turnerae: TERTU_2834

Entry

TERTU_2834        CDS       T00952

Symbol

truD

Name

(GenBank) tRNA pseudouridine synthase D

K06176

tRNA pseudouridine13 synthase [EC:5.4.99.27]

Organism

ttu Teredinibacter turnerae

Brite

KEGG Orthology (KO) [BR:ttu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ttu03016]
    TERTU_2834 (truD)
Enzymes [BR:ttu01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     TERTU_2834 (truD)
Transfer RNA biogenesis [BR:ttu03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TERTU_2834 (truD)
Prokaryotic type
    TERTU_2834 (truD)

SSDB

Motif

Pfam:

TruD

Other DBs

NCBI-ProteinID:

ACR11594

UniProt:

C5BMS1

Position

complement(3120898..3121887)

AA seq 329 aa
MGDTPFDLNFPFAYGGPCTQADFRTHPDDFIVDEILLEPPSGEGEHLCLQLTKRGENTGW
LAEQLAKAFGVRPVDIGYHGLKDRHACTTQWFSVHLPKPDPEQAQILANLPERLEAQVVL
REVRRHNKKLRRGGHLANRFTITLRNLSSDDGVDARLNRIAAEGVPNYFGEQRFGNHGSN
LIWADRWLSGGEAIRNRGKRIMAQSAARSWLFNQVLAARVRDDSWRHATFDESQPSGPLW
GRGRPVATEPQREYEQAVIAPWSAWLDPLEHVGLNQERRALVLQPQECHWQLDAERLVIS
FMLPPGGYATAVLRELCTLNNLSMPEAEQ

NT seq 990 nt +upstreamnt +downstreamnt
atgggcgataccccttttgatctgaactttcccttcgcgtatggcggcccgtgtacacag
gcggattttcgcactcacccagatgattttatcgtggatgaaattttgctcgagccgccc
agcggggagggtgagcacctttgcttacagctgaccaagcgaggagagaataccgggtgg
ctcgcggaacagctggctaaagcgtttggtgtgcgcccggtggatattggctatcacggg
ttgaaggatcggcacgcctgtaccacacagtggttcagcgttcacctgccaaagcccgat
cccgagcaggcgcagatattagcgaatttgccggaacgcctggaagcacaagtcgtgctg
cgtgaggtacgtcgacacaataaaaagctccgccgtggcgggcacctggcgaaccgcttc
accataaccttacgcaatttaagttcggatgatggtgtggatgcgcggttaaatcgcatt
gccgccgagggggtgcccaactatttcggggagcagcgttttggcaatcatggcagtaac
ctgatctgggctgaccgttggttgtctggcggtgaagcgatacgtaaccgcggcaagcgc
attatggcgcaatccgctgcccgatcctggcttttcaatcaagtgctcgcggcgcgggtt
cgggacgacagctggcggcacgcgaccttcgacgaatctcagccaagcggtcctttgtgg
gggcgcggacgcccagtggcgacagagcctcagcgggaatatgagcaggcggtgattgcg
ccatggtctgcatggctggacccgttggagcacgtgggcttgaaccaggagcggcgagcg
ctggtgttgcaaccgcaggagtgtcactggcaattggatgcagaacgcctagtaatcagc
tttatgttgccgcctggcggttatgccaccgcagtgttacgtgaactgtgtactctcaac
aacctctccatgccggaggcggagcaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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