KEGG T00952: TERTU

Teredinibacter turnerae: TERTU_4342

Entry

TERTU_4342        CDS       T00952

Name

(GenBank) RNA methyltransferase, TrmA family

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

ttu Teredinibacter turnerae

Brite

KEGG Orthology (KO) [BR:ttu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ttu03009]
    TERTU_4342
Enzymes [BR:ttu01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     TERTU_4342
Ribosome biogenesis [BR:ttu03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TERTU_4342

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25

Other DBs

NCBI-ProteinID:

ACR14697

UniProt:

C5BIF8

Position

complement(4800866..4802047)

AA seq 393 aa
MTSFKRRTPKRAQFRSEVFSAEVRDLASDGRGVLQHPSGKTFFAPGVWPGEAGEFRSTGG
KGRVGFAELVALSPGREHPQRQNAPCAHHGFGAAQCGGCPWQFMAYDAQLAAKQTRVTAE
LARLGEADKVLPIWPSPQIFGYRNRAQFKTDGREIGYVSAASNTLAPVQHCPVLSEPNQH
TLQTLRAQLPNRAWQPARRSAWRTLDIDESIAAEQVCVDQRLPFKQGNSAQNTRMRAWLA
ERIAPGTQQAVELFCGSGNLTEVLCDAGVAKISAVEVVDEAIAALRAKVLAGVEPIVCDL
FADDGLASVARALKTAELLVLDPPREGWKSRAAAWPKNCQVRQVLSVSCDLATFTRDLSF
FLDQGFRLVEVQPLDQFPHTPHIELLAHLEKDR

NT seq 1182 nt +upstreamnt +downstreamnt
gtgacatcctttaagcggcgcacacccaagcgcgcccaatttcgcagtgaagtattctct
gccgaggtgcgagacctggcaagtgacggtcgcggcgtacttcagcacccgtctggcaaa
acatttttcgcgcccggtgtgtggccgggtgaagcgggtgaattccgcagtaccggtggc
aaagggcgggtgggttttgctgagctggtggcgctgagcccaggccgcgagcacccgcaa
agacaaaatgcgccttgtgcgcatcatggttttggcgcggcacagtgcggcggatgcccc
tggcagtttatggcctacgacgcgcagctcgccgccaagcaaacgcgggtaaccgccgag
ctggcgcgccttggggaagccgataaggtattgcccatttggccgtcgccacagatcttt
ggctatcgcaatcgcgcacagttcaaaacagacgggcgcgaaattggctatgtgtcggca
gccagcaataccttggcgccggtgcagcattgcccggtgctgtcggaacccaatcagcac
accttgcaaacactgcgggcgcaattgccgaaccgcgcctggcagccggcgcggcgctca
gcctggcgcacgctggatatcgatgaatcgattgccgccgagcaggtgtgcgtcgatcaa
cgcctgccgttcaaacagggcaacagcgcgcaaaatacccgcatgcgcgcgtggttggct
gagcgcattgcgccgggtacgcagcaagccgtggaattgttctgcggttctggcaacctc
actgaagttttgtgtgatgccggtgtagcaaaaattagtgctgtggaagtggtcgatgag
gcgatagccgcgttgcgcgctaaagtgctggcaggcgtggagcctatcgtctgcgatcta
tttgcggacgacggtctggcaagtgtagcgcgcgcgctgaaaacagcggaattgctggtg
ttggacccgccccgcgagggctggaagtcgcgtgcggcagcctggcctaagaactgtcag
gtacgccaggtgctatcggtgtcttgcgatctggcaacctttacgcgcgatctgagtttt
ttcctggaccaggggtttcggttggtggaagtccagccgctcgatcaatttccgcacaca
cctcacatcgagttgctcgcgcatcttgaaaaagataggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

Download RDF

DBGET integrated database retrieval system