KEGG   Tupaia chinensis (Chinese tree shrew): 102473261
Entry
102473261         CDS       T02978                                 
Symbol
COL24A1
Name
(RefSeq) collagen type XXIV alpha 1 chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04820  Cytoskeleton in muscle cells
tup04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:tup00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102473261 (COL24A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102473261 (COL24A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tup00536]
    102473261 (COL24A1)
Glycosaminoglycan binding proteins [BR:tup00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102473261 (COL24A1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 102473261
NCBI-ProteinID: XP_006149538
Position
Un
AA seq 1691 aa
MLALEVLDKMWFREEGIDVLHQLGLGGKDVRHSSSVTAVPSSSTPLPQGFHLTESGIILK
NDAYIESPLMKILPVNLGQPFTILIGLQSQRVNNAFLFSIRNKNRLQLGVQLLPKKLVVH
IGGKQSVFFNYSVHDERWHSFAITIRNQVVSMFVECGKKYFSRETISEFQTFDSNSIFTL
GSMNNNSVHFEGIVCQLDIIPSVEASADYCRYVKEQCRHADQYQPGTNLPHTTIITTTTP
ERSSQPKGFSERVPSEDTFTEGKSIANVINSDSATVHKRQGHQMSRSQITSLHSGNVSAV
DLINLGIPTKEIITGEHTQTNLSLSMTDHYLTEARMNTKGKFSSFLFNVSENITQHDRVT
GLSLFKKTPSSSVLPHIKQDTITNLKKAITANLHTNELMEMQQILNTTFYRMTDHPSMDN
HLDLRKEGEFYPDATYPIENSYETELYDYYYYEDLNAMFEMENLRGPKGDTGLPGPPGMA
GIPGPPGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVSGEKGDRGLSGLIGPP
GIQGDKGLKGHPGLPGLRGEQGISGLTGNIGSPGYPGRQGLAGPEGNPGPKGVRGFIGSP
GEVGQLGPIGERGIPGIRGKKGLKGRQGFLGDFGERGPAGLDGSPGLVGGIGPPGFPGLR
GNVGPVGPSGPSGVPGPMGLPGNKGLPGNKGDKGEQGIAGEAGEPGYPGDKGAVGLPGLP
GMRGKPGPSGQPGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLK
GTQGEEGLIGPFGELGPRGKPGRKGFAGEPGPEGLKGEVGDQGNIGKVGETGPVGLPGEV
GMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPMGPLGLPGLVGVRGPPGSQGPK
GQRGPRGPDGLSGEQGVQGAKGEKGDQGKRGPHGLIGKTGNPGEKGIQGKPGLQGPPGST
GDRGLTGEPGPRGLQGDAGPPGEMGIEGLPGIEGESGLQGEPGAKGDTGPAGSVGDAGEP
GLRGEPGAPGEEGLQGKDGLKGTLGERGLPGEDGEKGEMGLAGTIGPLGRPGRMGLPGAE
GILGIPGQRGRPGKKGDKGQIGPIGEVGKRGAPGQIGKSGPKGARGTRGAVGNLGLMGPA
GEPGIPGYTGHQGQPGLSGLPGPKGEKGYPGEGSTVLGLPGPRGEPGPMGEQGERGEPGV
EGYKGHVGVPGPRGATGQQGPPGEPGDQGEQGLKGERGSIGPQGKKGAPGPSGKPGIPGL
PGLPGLKGMHGFQGADGISGNPGKLGLPGKQGLPGSRGSPGRTGLSGPPGPRGIKGSVGL
PGSPGVPGPKGEQGLLGQPGIQGKRGHQGAQGDQGPRGEPGLKGQPGEHGGQGLTGFQGF
PGPKGPEGGIGIVGISGPKGPVGQRGNTGPLGREGIIGPTGRIGPRGEKGFRGEPGPQGP
KGQPGPPGPPGAPGPRKQMDINAAIQALMESNAALQMESYQNTEVTLIEHSAEIFKTLNY
LSNLLHSIKNPVGTRDNPARICKDLLDCEHKVSDGKYWIDPNLGCPSDAIEVFCNFSAGG
QTCLSPVSVTKLEFGVGKVQMNFLHLLSSEASHIITIHCLNAPKWTTAQTRGSELPVGFK
GWNGHIFEANTLLEPEVLSDNCEIQDGSWHKAKFLFHTQDPNQLPVIEVQKLPQLKTEQK
FYIESSSVCFL
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgttggctttagaagttctggacaagatgtggttcagagaagaaggcatagatgttctt
catcaactaggccttggaggcaaagatgtaagacattcatcatcagtgactgctgtacca
tcatcatctacaccattacctcagggtttccatttaacagagtcaggcatcattttaaaa
aatgatgcttatattgagtcacctctaatgaaaattttaccagtcaacttaggacagcca
tttacaatattgattgggttacaatcacagagagtgaacaatgcatttctcttcagcatt
agaaataaaaatagacttcagttaggagtacaattactacctaaaaaattagtagtacat
attggtggaaagcaatctgtgtttttcaactacagtgttcatgatgagcgatggcactcc
tttgccattactattagaaaccaagttgtttcaatgtttgttgagtgtggaaagaaatat
tttagcagagagactatttcagaatttcagacttttgattctaacagtatatttacccta
ggaagtatgaataataattctgtccattttgaaggaatagtatgtcagttggatattatt
ccttctgtagaagcatctgcagactactgcagatatgtgaaagagcagtgtcgccatgca
gaccaataccaacctgggacaaaccttcctcacacaactatcataacaactacaacacca
gaacgttcttcccagcccaaaggatttagcgaaagagtaccatcagaggatacatttact
gaaggcaaaagcattgcaaatgtcataaatagtgattctgcaacagtgcataaaagacaa
ggacaccaaatgtcaagatctcaaataacttctcttcattcaggaaatgtctcagctgtg
gatctcataaaccttgggattcctaccaaagaaatcatcactggggaacacactcaaaca
aatttaagcctgtccatgactgatcattatctcactgaggcaagaatgaataccaagggt
aaatttagttcttttctcttcaatgtttctgagaatatcacacaacatgatagagtaact
ggtctatcactgtttaagaagacaccatcatcatctgttcttccacatataaaacaagat
acaattactaatctcaagaaagccatcacagcaaatctacacactaatgaactcatggaa
atgcaacagattttaaacacaaccttctatagaatgacagatcatccatctatggataat
catcttgatctcaggaaggaaggtgaattttatcctgatgctacttatcccatcgaaaat
agctatgaaactgagctttatgattattattattatgaggatcttaatgcaatgttcgaa
atggagaatctaagagggccaaaaggggacactggactgccaggcccacctggtatggca
ggtatcccaggtccaccaggaaagagaggtccacggggcataccagggccacatggaaat
cctgggttacctggattaccaggtccaaagggccccaaaggagatccaggattttcccca
ggtcaagctgtttctggagaaaagggtgatcgaggcctttctgggttaataggtccccct
ggtatacaaggtgataagggcctcaaaggacatccagggctcccaggactccgaggtgaa
caagggatttcaggactcactggtaatattggttcacctggttaccctggcaggcagggt
ttagctggaccggaaggtaatccaggtcctaaaggtgtacgaggttttattggctctcct
ggagaagtaggacaactgggacccattggagaaaggggaattcctgggatccgtggaaag
aagggccttaaaggaagacagggttttttaggtgactttggagaaagaggtcctgctggt
cttgatggcagtcccgggcttgtaggtggtattggtcctcctgggtttcctggactaaga
ggtaatgtgggccctgtgggaccaagtggaccttctggagttcctggcccaatgggcctt
ccagggaataaggggctacctggaaacaaaggtgataagggtgaacaaggcattgcagga
gaggcaggagaaccagggtatccaggagacaagggtgctgttggtttgccaggactacca
gggatgagaggaaagccaggaccttcaggccaaccaggtgacccaggactccaaggacca
tctggccctccaggaccagagggttttccaggagatattgggattcctggacaaaatggc
cctgaaggaccaaagggactccttggaaatagagggcctcctggacctcctggtctcaaa
ggaactcagggagaagaaggactgattggaccctttggagaactcgggccaagaggaaaa
ccaggtcgaaaagggtttgctggtgagccaggaccagaaggcttaaagggagaagtagga
gatcaagggaatattggaaaagttggtgaaacaggacctgtaggcctacctggagaagtt
gggatgactggaagcattggcgaaaagggagaacgtggaagtccaggtccactaggtccc
caaggagaaaagggtgttatgggatatccaggtcctcctggagttccaggacccatgggt
ccattgggattacctggtcttgtgggggtgagaggaccacccggaagtcaaggtcctaaa
ggacaaagaggaccaagaggaccagatggtctctcaggggaacaaggtgtacaaggtgcc
aagggtgaaaagggagatcaaggaaaaagagggcctcatggtcttattggtaagactgga
aaccctggagagaaaggaattcaaggcaaaccaggtttacagggaccccctgggagtaca
ggagacagaggacttacaggagagccaggaccacgaggactgcaaggtgatgctggacct
cctggagaaatgggtattgagggacttccagggattgagggagaatctggtctgcaaggc
gagccgggtgcaaagggagacactgggcctgcgggcagtgttggagacgctggggagcca
gggttgcggggtgaaccaggagctcctggagaagaaggactccaaggaaaagatggatta
aaggggaccttgggagaaaggggacttcctggagaagatggagaaaaaggagagatgggc
ttagcaggaactatagggcccttgggtagaccaggtcggatgggccttccaggagctgaa
ggaattttgggaattccaggtcaaagaggtcgcccaggaaaaaagggtgataaaggacaa
atcggaccaataggagaagttggaaaaagaggtgctcctggacaaattgggaaaagtggt
cctaagggtgccagaggaacaagaggtgctgtgggaaacttaggtttgatgggacctgct
ggagaaccaggaattccaggatatacaggccatcaaggtcaaccaggactttctgggttg
ccaggacccaaaggagaaaagggttacccaggagaaggtagtacagtcctaggactacct
gggcctcgaggtgaaccaggtccaatgggggaacaaggagagagaggagaacccggcgta
gagggctataagggtcatgtgggtgtaccaggaccaagaggtgccactggacaacaaggg
cccccaggcgagccaggtgaccagggtgaacaaggactaaaaggggagagaggatctata
ggccctcaagggaaaaaaggagctcctggtccttctgggaaacctgggattcctggactt
ccaggcctacctgggctaaaaggcatgcatggattccaaggagcagatggcatttcagga
aaccctggaaaacttgggctaccaggaaagcagggacttcctggcagcagaggcagccca
ggaagaacaggactatctgggcctccaggtcctcgaggaataaagggttcagtaggcctg
ccaggaagcccaggagttccaggcccaaagggagaacaagggctccttggtcaacctgga
attcaaggtaaaagaggtcaccaaggagcacagggtgatcaaggaccacgtggagagcct
ggcctgaaagggcagcctggagaacatggtggtcaaggtttaacgggtttccaaggattt
ccaggccccaaaggtcctgagggaggtatcggcattgttggaatttcaggtcctaaaggt
cctgttggacagagaggaaacactggccccctaggcagagaaggtataataggcccaaca
ggtagaattggacccagaggtgaaaaaggctttagaggtgaacctggtccccaagggcca
aaaggtcaaccagggcctcctggtccacctggagcaccaggcccaagaaaacaaatggat
atcaatgctgctattcaagccttgatggaatcaaatgctgccttacagatggagagctac
cagaatactgaagtgactttaatcgagcacagtgcagagattttcaaaaccctgaactac
cttagcaatttactgcacagcatcaagaatcctgttggcacccgagataacccggcacga
atctgcaaggatttgcttgactgtgaacacaaagtatcagatggaaaatactggattgat
ccgaatctcggatgtccttcagatgctattgaggttttctgcaatttcagtgctggtggc
cagacatgtttatctcctgtttctgtgacaaagttggagtttggagttgggaaagtccag
atgaacttccttcatttgctgagttcagaagcctctcatatcatcactattcactgtcta
aacgcaccaaaatggacaactgctcaaacaagaggctcagagttgcctgttggtttcaag
ggatggaatggccacatttttgaagcaaacactctacttgaacctgaagtgctttcagac
aattgcgagattcaagatggcagctggcataaggcaaaattcctatttcacacccaggac
cctaatcaacttccagtgatcgaagtacaaaaacttcctcagctcaaaactgagcagaag
ttttacatcgaaagcagttctgtatgctttctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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