KEGG   Tupaia chinensis (Chinese tree shrew): 102489382
Entry
102489382         CDS       T02978                                 
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04110  Cell cycle
tup04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:tup00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102489382 (SMC1A)
   04114 Oocyte meiosis
    102489382 (SMC1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tup03036]
    102489382 (SMC1A)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    102489382 (SMC1A)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    102489382 (SMC1A)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 ABC_tran Mce4_CUP1
Other DBs
NCBI-GeneID: 102489382
NCBI-ProteinID: XP_014440374
Position
Un
AA seq 1230 aa
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKSRQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEMSVAALALLFA
IHSYKPAPFSVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGV
YPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgggtttcctgaagttgattgagatcgagaactttaagtcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcatcggacccaatggctccggtaagtcaaac
ctcatggatgccatcagctttgtgctgggtgagaaaaccagcaacctgcgagtaaagacc
cttcgggacctgatccatggagctcctgtgggcaagccagctgccaatcgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgcccgcgttattgtaggg
ggttcttctgagtacaagatcaacaacaaagtagtccagctacatgagtacagtgaggaa
ttagagaagttgggcattcttatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gaatccattgccatgaaaaaccccaaagagaggacagctctatttgaagagatcagtcgc
tctggggagctggctcaggagtatgacaagcgaaagaaagaaatggtgaaggctgaggag
gacacgcaatttaattatcatcgcaagaaaaacattgcagctgaacgtaaggaggccaaa
caggagaaagaagaggctgaccgttaccagcgcctgaaggacgaggtggtgcgagctcaa
gtgcagctacagctttttaaactgtaccataatgaagtggaaatcgagaagctcaacaaa
gaactggcctctaagaacaaggagatcgagaaggacaaaaagcgtatggataaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcaacagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtacattaaa
gccaaggagaacacctcccataaaatcaagaagctggaagcagccaagaaatctctgcag
aatgctcagaagcactataagaagcgtaagggtgacatggatgagctggagaaggagatg
ctgtcagtggagaagtcccggcaggagtttgaagagcggatggaagaggagagtcagagt
cagggcagagacttgaccctagaggagaatcaagtaaagaaataccaccggttgaaagaa
gaagccagtaagagagcagctaccttagcccaggagctggagaagttcaatcgagaccag
aaagctgaccaggaccgtctggatctggaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaagcggattgagaaattggaggaa
tacatcaccactagcaagcagtccttagaggagcagaagaagctagaaggcgaattgaca
gaggaggttgagatggccaagcggcgtattgatgagatcaataaagagctgaaccaggtg
atggaacagctaggtgatgcccgcattgaccgccaggagagtagccgccagcagagaaag
gcagagataatggaaagcatcaagcgcctttaccctggctctgtgtatggtcgcctcatt
gacctctgccagcccactcaaaagaagtatcagattgctgtaaccaaggtgttgggcaag
aacatggatgccattattgtggactcagagaagacaggccgggactgtattcagtatatt
aaggagcagcgtggggagcctgagaccttcttacctcttgactacctggaggtgaaacct
acagatgagaaactccgggagctgaagggggccaaactagtgattgatgtcattcgctat
gagccacctcacatcaaaaaggccctgcagtatgcttgtggcaatgcccttgtctgtgac
aacgtggaggatgcccgccgcattgcctttggaggccaccagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggagtgatctctggtggggccagtgacttgaag
gccaaggcacggcgctgggatgagaaagcagtagacaagttgaaagagaagaaggagcgg
ttgacagaggagttgaaagagcagatgaaggcaaagcggaaagaggcagaactgcgtcag
gtacagtctcaggcccatggactacagatgcggctcaaatactcacaaagtgacttagag
cagaccaagacacgacatctagccctgaatctgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgtattaatgacatcaagaggatcatccagagccgagaaagg
gagatgaaagacttgaaagagaagatgaaccaggtagaggatgaggtgtttgaagaattt
tgtcgggagattggtgtgcgcaacatccgggagtttgaagaagagaaggtgaaacgtcag
aatgaaattgccaagaagcggttggaatttgagaatcagaagactcgcttgggtatccag
ttggattttgaaaagaaccaactgaaagaagaccaggataaagtacatatgtgggagcag
actgtgaaaaaggatgaaaatgagatagaaaagctcaagaaggaagaacaaagacacatg
aagatcatagatgagaccatggcccagctacaggacctgaagaatcagcatctggccaag
aagtcagaagtcaatgacaagaatcatgagatggaggagattcgtaagaaactagggggt
gccaacaaggaaatgactcatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaatttgctacaggcctgcaagatgcaggacatcaagttg
ccactatctaaaggaaccatggatgatattagtcaggaagagggtagctcccagggggaa
gagtcagtgagtggttcgcagagaacatccagtatctacgcacgagaggccctcatagag
attgactacggtgacctgtgtgaggacctgaaggatgctcaggctgaggaggagatcaaa
caggagatgaacacattgcagcagaagctgaatgagcagcaaagtgtgcttcagcgtatt
gctgcccctaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgagtttgaggcagcccgaaagcgagcaaagaaggctaagcaggcatttgaa
cagatcaagaaggagcgctttgaccgcttcaatgcttgcttcgaatcagtggctaccaac
attgatgaaatctataaggccctgtcccgcaacagcagtgcccagggccctgagaacccg
gaggagccctacttggatggcatcaactacaactgtgttgctcctggcaaacgcttccgg
cctatggacaacttgtcagggggagaaatgtcagtggcagctctggccctgctctttgcc
atccatagctacaagccagcccccttctccgtactggatgagattgatgctgccttggat
aacaccaacattggcaaggtggcaaattacatcaaggagcagtccacctgcaacttccag
gccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctcattggagtc
tatcctgagcaaggggactgtgtgatcagcaaagtcctgaccttcgaccttaccaagtac
ccagatgccaaccccaaccccaatgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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