KEGG   Tupaia chinensis (Chinese tree shrew): 102500880
Entry
102500880         CDS       T02978                                 
Symbol
DHX40
Name
(RefSeq) DEAH-box helicase 40
  KO
K18711  ATP-dependent RNA helicase DHX40 [EC:3.6.4.13]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102500880 (DHX40)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA processing factors
   Other processing factors
    102500880 (DHX40)
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C AAA_22 HA2_N T2SSE nSTAND3 AAA_19 SLFN-g3_helicase AAA_30 Flavi_DEAD RuvC_1 PhoH
Other DBs
NCBI-GeneID: 102500880
NCBI-ProteinID: XP_006154682
Position
Un
AA seq 787 aa
MSRFPAVAGRAPRRQEEGERSRDPXXXXXXXXXXERPSAVCIAEREEKGCTSQEGGTTPT
FPIQKQRKKLIQAVKDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI
SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL
DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG
RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL
FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL
TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD
FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDA
IDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEY
QKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQ
LRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHI
HPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVAR
RELREDARKRWTNKENVKQLKDGISKEVLKKMQRRNDDKSISDARARFLERRQQRIQDHS
DTLKETG
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgtcccggtttcccgccgtcgcgggcagggcgccaaggcggcaggaggagggtgagcgg
tcaagagacccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagcggccctcggctgtt
tgcatcgctgagagagaagagaaaggatgcacatcacaggagggaggaactactccaact
tttcctattcagaaacaaagaaaaaagcttattcaggctgtgaaggacaattcgtttctt
attgttactggaaatacaggaagtggtaaaacaactcaactcccaaaatacctatatgaa
gcagggttttcacaacatggaatgattggtgtgactcaaccacgaaaagtagctgccata
tcagtggctcagagggttgctgaagaaatgaaatgtactttgggatccaaagtaggatac
caagttcgtttcgatgattgcagctctaaggaaacagcaatcaaatacatgactgatggg
tgtttactgaaacatatccttggagatccaaatcttaccaaattcagtgttattattttg
gatgaagcccatgagagaactctaactacagatatcttatttggtttattgaagaagctg
tttcaggagaagtcacctaataggaaggaacatttaaaggtggtggtaatgtcagcaact
atggaattagcgaagctctctgcgttctttggaaattgtccaatatttgacatacctgga
agactttatccagtcagagagaaattctgcaatttgattggcccacgagacagagaaaat
actgcatatattcaagcgattgtgaaagtaaccatggatatccatttgaatgaaatggct
ggcgacatcttggtttttctgactggtcagtttgaaatcgagaaaagttgtgaattactt
tttcagatggcggagtctgttgattatgattacgatgttcaagataccaccctagatggc
cttttaatattgccgtgttatggatctatgacaacagatcaacaaaggagaatatttttg
ccacctccacctggaattaggaaatgtgttatatccaccaacatctctgcaacatctttg
acaatagatggcatcaggtatgtagtagatggtggctttgtgaagcaattaaatcacaat
cccagattaggtttggacatcctggaggtagttccaatttcaaagagtgaggcattacag
cgaagtggccgagctggtagaacatcctcaggaaaatgttttcggatctatagtaaagat
ttttggaaccagtgtatgcctgaccatgtaatccctgagattaagagaactagtttgaca
tctgtagttctgaccttaaagtgccttgccatacatgatgtcataaggtttccctatttg
gatccacctaacgagagacttattttggaagctcttaaacaactttaccagtgtgatgct
atcgacaggagtggccatgtgaccagattaggtttgtctatggtggagtttcctctcccg
ccacatctgacatgtgcagtaataaaggctgcttctctggactgtgaagatctactactt
ccaatagcagccatgttgtctgtcgagaatgttttcattagacctgttgatccagaatac
cagaaagaagcagaacagagacaccgagaactggcagctaaagctggaggattcaacgac
tttgcaactttagccgtcatctttgaacaatgcaaatcaagtggagctccagcttcatgg
tgccaaaaacattggattcattggaggtgcttattttctgcatttcgtgtggaagctcaa
cttcgagaactaatcaggaagcttaaacagcaaagtgatttcccaagagagacttttgaa
ggccctaaacatgaagtactacgaagatgtctttgtgcagggtatttcaaaaatgtagct
cgaagatctgttgggagaacattttgcacaatggatgggcgtggaagcccagttcatatt
catccttcttcagcacttcatgaacaggaaaccaaacttgaatggataatttttcatgag
gtattagttaccaccaaagtctacgcaagaattgtgtgtccaatccgttatgaatgggtg
agagacttgttacctaagttacatgaatttaatgcacatgatttgagcagtgtggcccgg
cgtgaactgagagaagatgcaagaaagagatggacaaataaggaaaacgtaaagcagcta
aaggatggaatatcaaaagaagtcctaaagaaaatgcaaaggagaaatgatgacaaatcc
atatcagatgcacgggctcgtttccttgagagaaggcagcaaaggatccaagaccacagt
gatacactgaaggaaacaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (38)   

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