KEGG   Turicibacter sp. H121: AT726_02760
Entry
AT726_02760       CDS       T04254                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tur  Turicibacter sp. H121
Pathway
tur03030  DNA replication
tur03430  Mismatch repair
tur03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AT726_02760
   03430 Mismatch repair
    AT726_02760
   03440 Homologous recombination
    AT726_02760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tur03032]
    AT726_02760
   03400 DNA repair and recombination proteins [BR:tur03400]
    AT726_02760
Enzymes [BR:tur01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AT726_02760
DNA replication proteins [BR:tur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AT726_02760
DNA repair and recombination proteins [BR:tur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AT726_02760
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon ERCC3_RAD25_C T2SSK
Other DBs
NCBI-ProteinID: AMC07980
UniProt: A0A120IDM9
Position
complement(559326..562367)
AA seq 1013 aa
MGFTHLQVRSAYSLLNSSIKLADYVSLATSNQLKSLALVEEGSMHSAIKFYIACQKAGIK
PIIGMSLKIRGEGFEDEWTLLAKNSKGYETLLKLASLTALEDGGVDVEEVIAQSSNLIVI
TSGERGVLVSAIKQHQEECLNRYYHQYLKRLEHLYIGLLRVNHLTYEVSRHLIHWSERVG
LKTVALNDVRYIRKEDAKTLTFLRAIKENQSIGQTDIQDVERYFKTEEEMRALFADCPQA
IDMTEEIVASCTVKIPLHQQLLPKFPTPEGASSDSYLEALCYKGLMKRYGDNLSPVHKNR
LSYELSIIKEMGFADYFLIVWDFIKYAKMNQIFVGPGRGSAAGSIVSYVLGITNVDPIKY
NLLFERFLNPERISMPDIDIDFQDNRRDEVIQYVQTKYGSRCVVQIATFGTFQSRSAWRD
LARIHDVETQLINKVAGYIYSGVTLKDIYEQSRELREFFSSYPKLEVIYQEAMKIEGLPR
HTSIHAAGVIISDHDLTDYTAIMEGPTGVYVSQYEAEDLEAIGLLKMDFLGLKNLNMLQQ
IITLIKKKSDPTFDLTTIDFNDAKTYEMIAKGQTTGVFQLESEGMRQVLKKVCPTSLEDI
VACNALFRPGPMESIPLFAARKHHEQPVDYYHPSLQGILHNTYGIIVYQEQIMQIANVVS
GYTLGEADVLRRAVSKKKKDVLEEEERKFVAKAVERGYPIEIASQLYALILKFANYGFNR
SHAVAYSMIAYQMAYLKAHYPAYFMSVALTNVIGSERHTSQYIREAKQLNLSILPPSVNK
SGLSYQIEENQIRFSLLPIKHIGLNLARQLIEEREAGLFKSVYDFVVRTRRFMNQRAYEG
LIDVGALDEFGYNRTTLHHNLGAILDFSKYDGGLFETDFEIQVLHKDLSKLEMMKREKEL
LGFYLNSHPIHMLAKAAQENGWYYPSDIMNINLSQATFIGFVEKFREIRDKKGKLMAFMD
ITDEHMSLTVTVFSDVYTSEYKSLLGKVIAVNGRINMRNNEKNLNLSKIIAVS
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgggatttacacatttacaggtacggtcagcctattctttattaaatagttctatcaaa
ttagctgattatgtgagtttagccacttcaaatcaattaaagtcattggctttagtcgaa
gaagggtcgatgcatagtgcgataaagttttatattgcatgtcaaaaagcagggattaaa
ccgattattgggatgagcttgaagattagaggtgaaggttttgaagatgagtggacgtta
ttagctaaaaatagtaaaggttatgaaactttattaaagttagcttctttgacagcacta
gaagatgggggagttgatgttgaagaggtaatcgcacaatcatcaaacttgatcgttatt
acgagtggcgaacgtggtgttttagtttctgctattaagcagcatcaagaagaatgttta
aatagatattatcatcagtatttaaagcgccttgaacatctctatattggacttttacgt
gttaatcatctgacgtatgaagtctctcgccatctgattcattggtctgaaagggttgga
ctaaagacagtggccttaaacgatgtacgttatattaggaaagaagatgcaaaaacttta
acgtttttgagagccattaaagagaatcaatcgattggtcaaactgacattcaagatgta
gagcgatattttaaaacggaagaggagatgcgtgctttatttgctgattgtccgcaggcc
attgatatgacagaggagattgttgctagctgtacagtaaagattccgttacatcagcaa
ttgttaccgaagtttcctacgcctgagggagcctcttctgatagttatttagaggcgtta
tgttataaagggttgatgaaacgttatggtgataacctgtcacctgttcataaaaatcgt
ttgagttatgagctgtctatcattaaggaaatgggatttgctgattatttcttgattgtt
tgggattttattaagtatgcgaagatgaatcaaatttttgttggcccgggtagggggtct
gctgctggatcgattgtgtcttacgttttaggaattactaatgtcgatccaattaaatat
aatcttttatttgaacgatttttaaatcctgaacgtatatccatgccagatattgacata
gattttcaagataatcgacgtgatgaagtgattcaatatgtacagactaagtatggttct
agatgtgttgttcagattgcgacatttggaacatttcaatcacgttccgcttggcgtgat
ttagcgcgtattcatgatgttgagactcagttaattaataaagtagcgggatatatttat
tctggcgttacattaaaggatatttatgaacaaagtcgtgagttacgagagttcttttca
agttatcccaagctagaagtgatttatcaagaagcaatgaaaattgaggggttacctcgt
catacttcaattcacgctgcaggggtcattattagtgatcatgatttaacggattataca
gcgattatggaaggaccgacgggagtttacgtgtcacaatatgaagcggaggatttagaa
gcgatcggtttattaaagatggattttttaggacttaaaaatttaaacatgcttcaacaa
atcattacattgattaagaagaagtctgatccaacgtttgatttaacgactattgatttt
aatgatgcgaagacttacgagatgattgcgaagggtcagacaactggggtgttccaacta
gagtctgaaggaatgcgtcaagttttaaagaaagtttgtccaacgtctttagaagatatt
gtggcatgtaatgctttatttagaccgggacccatggagagtattcctctttttgcagcc
cgtaaacatcatgaacagccagtagattattatcacccgagtttacagggtatcttacat
aacacttatggaatcattgtttatcaagaacagattatgcaaattgccaatgtcgtttct
ggctatacattaggagaagctgatgttttacgacgcgcagtttcgaaaaagaaaaaggat
gtattagaggaagaagagcgaaagtttgtggctaaagcagtcgaacgaggttatccaatt
gaaattgccagtcaactatatgctcttattttaaagtttgcgaattatggatttaatcgt
agtcatgccgtagcatatagtatgattgcttatcaaatggcatacttaaaagcacattat
cccgcttattttatgagtgttgctttaacgaatgtcattggaagtgagcgtcatacttca
cagtatattcgtgaagctaagcaattaaacttatctatcttacctccttctgtgaataag
agtggtttgagttatcagattgaagaaaatcaaattcgatttagcttgttaccgattaag
catattggtttgaatttagcgcgtcaattaattgaggaacgtgaagcgggattgtttaaa
tcggtatatgactttgttgttaggacaagacgatttatgaatcagcgagcatatgaagga
ttaattgatgttggagcattagatgagtttggatataatagaacaacactacatcataat
ttaggagctatcttagatttttcaaagtatgatggtgggttattcgagactgattttgaa
attcaagttttacacaaggatttatcaaagctagaaatgatgaagcgtgagaaagaatta
ttaggattttacttaaattctcatccgattcatatgctagcaaaagctgcccaggaaaat
ggctggtattatccaagtgacattatgaatattaatctatcacaagctacttttatcgga
tttgtagaaaaatttagagaaattagagataaaaaaggaaagttgatggcatttatggat
attactgatgaacacatgtcattaactgtaacggttttctcagatgtctatacaagtgag
tataaaagtcttttaggaaaagtgatagcggttaacggaagaattaatatgcgaaataat
gaaaaaaatctcaatcttagcaaaataatagcggtttcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (54)   

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