KEGG   Tetranychus urticae (two-spotted spider mite): 107360337
Entry
107360337         CDS       T04901                                 
Name
(RefSeq) regulator of nonsense transcripts 3A
  KO
K14328  regulator of nonsense transcripts 3
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013  Nucleocytoplasmic transport
tut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107360337
   03015 mRNA surveillance pathway
    107360337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tut03019]
    107360337
Messenger RNA biogenesis [BR:tut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     107360337
   mRNA cycle factors
    P-body specific factors
     107360337
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 107360337
NCBI-ProteinID: XP_015782453
UniProt: T1K3V9
Position
Unknown
AA seq 461 aa
MSDKNSDKFLSQVVIRHLPPTMTGEQFMNEISPVPAHNYFHFLKADLSLGQWAFTRACIN
FIRKDDIFIFKDKFDGYVFLDSNGTEYPATVEFSPYQKTPRRRVNSKGEPLTCKQRDPKC
GTIADDQDFKNFMENLSTAESEKNPASLEGYLVEIEAREKELKANHGTAKVITPLIEFII
QKKAEKMRLKEERREERRKQIEQKKAEVHKKDDKVTKVKQRDRKNKVKGNISVAKNEKRI
KEKEKEKEKEKEKEKEKEKEKPKFKEIQKEKDKDKDKDKPPERERKRERNHNKKDRDGDD
KNKHATGASKDPGKETDKDSKKDKNIDKNSYFVVTYSGDKGKDGARRGDSSSGKQSQQPG
VSKMDTSQNNEIKTTKKESDSSNDQISPNQSKATPKESKKSDNQRVRNKDRPALEIYRPR
RARNATSNSNGSNSESNDRPENKPERNMRKTKVYTRSRNTD
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagtgacaaaaattctgacaaatttttgtctcaagtcgtgattcgtcatttgccacca
accatgacaggagaacaatttatgaatgaaatatccccggttccagctcacaattatttc
cattttcttaaagctgacttgagtcttggtcaatgggctttcacgcgtgcttgtataaat
tttattcgtaaagatgacatattcatattcaaagataaatttgatggctatgtattcctt
gattccaatggaactgaatatccagctaccgttgaattttcaccttaccagaaaactcct
agacgtcgggtaaatagcaaaggtgaaccattaacttgtaaacaaagggatcctaagtgt
ggtaccatcgcagatgatcaagattttaagaatttcatggaaaatttgagtaccgcagaa
agtgaaaaaaatccagcatcacttgagggttacttggtagagattgaagctcgagaaaag
gagttgaaagcgaaccatggaactgctaaagtcatcacaccactaatcgaatttattatc
caaaaaaaggctgaaaagatgaggctcaaagaggagagacgtgaagaaagacgaaaacaa
atagaacagaaaaaggccgaagttcataaaaaagatgacaaagttactaaagtcaagcaa
agagatagaaagaataaagtaaaaggtaacatttcagtcgccaaaaatgagaaaaggatt
aaggagaaagagaaggaaaaggaaaaggagaaagagaaagaaaaggagaaagagaaggaa
aaacctaaatttaaagaaattcagaaggaaaaagataaagataaagacaaagacaaacct
cccgaaagagaaagaaaaagagagagaaatcataataaaaaagatcgtgatggtgatgac
aagaataaacatgcaaccggggccagtaaagatcctgggaaggaaactgataaagattcc
aaaaaggataaaaatattgacaagaatagttattttgtcgtaacatattctggagataaa
gggaaagatggagcccgtagaggtgattctagttcagggaagcaatctcaacaacctggt
gtatccaaaatggatacaagtcaaaataatgaaataaaaacaacaaagaaagaaagcgat
tcttccaatgaccaaatttctcccaatcaatcgaaagctaccccaaaagaaagtaaaaaa
tctgataatcagagagtcagaaataaagatcgacccgctttagagatatatcgaccaaga
agagctcgcaatgcgacgagtaactcgaacggatcaaattctgaatcaaatgatcgtcct
gaaaataagccagaaagaaacatgagaaaaacaaaagtatatacacgatcgcgtaatact
gattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

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