KEGG   Tetranychus urticae (two-spotted spider mite): 107370909
Entry
107370909         CDS       T04901                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107370909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tut03019]
    107370909
Messenger RNA biogenesis [BR:tut03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     107370909
SSDB
Motif
Pfam: WD40 CSTF1_dimer ANAPC4_WD40 NBCH_WD40 Frtz
Other DBs
NCBI-GeneID: 107370909
NCBI-ProteinID: XP_015794350
Position
Unknown
AA seq 436 aa
MSQHQSEQSTTIKERDTLYKLMISQLFYDGYQSIAHQLSGAIQLNLNHLASPPSDRLAHL
VGLGLKTEGENKEQESLLAPPISGIDLDFDTESHCSAPEPSTYETVYVTAHKGPCRAGAF
NIDGSLVATGSQDASIKILDVEKMIAKSIGTVSEDPQSNQTPEAHHPVIRTLYDHLEEVT
CLLFHPTEQLLISGSQDLTIKIYDFAKPAVKRALKTINEASVLRCMSFHPSGNFLLVGTQ
HPTVRLYDINTCQGYVGPNPSDQHSGPITACNYSYNGGIYVTSSKMENXXXXXXVSSRCI
NNFPRAHDGHEVSSVIFSRNGKYILSSGKDSLVKLWELSMSRCLIAYTXAGTAGKQMHRA
QAVFNHTEDFVLFPDERTTSLCVWDSRNAERQKLLSLGHNNTVRYFIHSPVSPAFLTCSD
DYRARFWYKKPDLSTN
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtctcaacatcaatctgaacaatcgacaacaatcaaggaacgagatactttatataaa
ttaatgatcagtcaactattttatgatggataccaatcaattgctcatcagttgtctgga
gctatacaactaaatctgaatcatttggcatcaccaccatcagaccgacttgctcatctg
gttggattaggtttaaaaactgaaggagaaaataaagaacaagaatcattattagcccca
ccaatatctggaattgatttagattttgacacagaatctcattgttcagctcctgaacca
agcacttatgaaactgtttatgtaactgctcataaaggtccttgtcgagctggtgcattt
aatattgatggttcattagtggctactggatctcaagatgcttctatcaaaatattagat
gttgaaaagatgattgcaaaaagtattggaactgtatcagaagatccacaatctaatcaa
acaccagaagctcatcatcctgttataagaacattatatgatcatttagaggaagttaca
tgtctactttttcatccaacggaacaattactcatttctggatctcaagatttaactatc
aaaatttacgattttgctaaaccagcagtaaaacgagctcttaaaacaatcaatgaagca
tcagtattacgttgtatgtcattccatccatcgggaaactttttacttgttggaacacaa
catccaactgttcgtttatacgatatcaatacctgtcagggttatgttggacctaatcct
agtgatcaacattctggtcccattactgcatgtaattattcatataatggtggaatttat
gttacaagttcaaagatggagaatannnnnnnnnnnnnnngagtatcatcacgatgtatc
aacaattttccacgagctcatgatggtcatgaagtatcttctgttatattttctcgtaat
ggtaaatatatactttcatctggtaaagactcattggtaaagttatgggaattatcaatg
tctcgttgtcttattgcatatactngagctggtacagcgggtaaacaaatgcatagagct
caagcagtcttcaatcatacagaagattttgttttatttcctgatgaacggacaactagt
ctttgtgtttgggactcaaggaatgctgaaagacaaaaacttttaagtttaggacataat
aatactgttagatatttcattcattcacctgtatcaccagcatttttaacgtgctcagat
gattatagagcaagattttggtataagaaacctgatttatcaacaaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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