KEGG   Trichophyton verrucosum: TRV_02570
Entry
TRV_02570         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
tve  Trichophyton verrucosum
Pathway
tve03020  RNA polymerase
tve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRV_02570
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRV_02570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tve03021]
    TRV_02570
   03400 DNA repair and recombination proteins [BR:tve03400]
    TRV_02570
Transcription machinery [BR:tve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     TRV_02570
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRV_02570
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 9583316
NCBI-ProteinID: XP_003023296
UniProt: D4D647
AA seq 135 aa
MVDDEHSSPSSWDLVRRRLKSRLILVSDTDSSLVTNSYELPSNKALGVPSTAIFTFNKED
HTLGNLIRSRLLQNQHVLFSGYRTDGQITPKEAVLAACHDLVKDLGTFSREFTKEYELRK
MVGAGTQQNDAPNGI
NT seq 408 nt   +upstreamnt  +downstreamnt
atggtcgacgacgagcattcgagtccttcgtcttgggacctggtgagaagaaggttgaag
tcgaggttgatactcgtgagtgacactgactcttctctggtgaccaactcctatgaactg
ccatctaacaaagctctaggtgtcccttctactgccatctttactttcaacaaggaggac
cacaccttgggcaacctgatccgctctcgtctgcttcagaaccagcacgtcctcttctct
ggataccgcaccgacggtcagatcacccccaaggaagcagttcttgctgcctgccacgac
ctggtcaaggatctcggcaccttcagccgtgagttcaccaaggagtatgagctgcgtaag
atggtcggcgccggcacccagcagaacgatgctccaaacggtatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system