KEGG   Thiocystis violascens: Thivi_4342
Entry
Thivi_4342        CDS       T02138                                 
Name
(GenBank) restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
tvi  Thiocystis violascens
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tvi02048]
    Thivi_4342
Enzymes [BR:tvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Thivi_4342
Prokaryotic defense system [BR:tvi02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Thivi_4342
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH Cohesin_load HTH_IclR
Other DBs
NCBI-ProteinID: AFL76152
UniProt: I3YGN4
Position
4717707..4720493
AA seq 928 aa
MKLQFDANQDYQLTAIRAVVDLFKGQPDASQTAVTRDDALSSLNLTETGVANRRVIDAAQ
WLKNLRAVQNAHDIEPSPTLEPMRLDDGTPVGTFPNFTVEMETGTGKTYVYLRTIHELAK
TYGFRKFVIVVPSVAIREGVLKSLKITSDHFQMLYDYARAEFMVYDSTKVNQLRHFALSD
AIQILVINIDAFAKDSTPAERPQPAGKSRKKPSKGNVINQVRETGIAPIQFIQDSHPILI
LDEPQNLETDLRKQAITRLNPLCALRYSATHRNTYNLIHSLDPVRAYELGLVKQIGVDSV
IALKDANQALVEIAGFNTGKRSVSAKLTIWVNQAQGPTKKTVTVRNGDDLYSVKFSNQRE
IYRDGFIVNEIDVGEGVITFANDVRVRLGQPHGALTDTILRLQIETTVRRHFEKARRLHP
LGIKVLSVFFIDRVANYRAHGEDGATSKGKFAVWFEDIYAQFRADPDYLGLMPHAPERVH
NGYFSQDKRAVSPFETLTGKSNADAEASAFELIMRDKERLLDLDEPLAFIFSHSALREGW
DNPNVFQICTLAESSSDLKKRQEIGRGLRLCVNQEGERVRDRGVNRLTVIANESYEDFAN
QLQAEMTEAGVRFKPEMVQNERDKVAVRLKKGYDTDRRFLDLWERIRACTRYQVQYSTAE
LTAKAARRIRDKLPMIERPRVAVIRADMAIGASGVSGTETGRRTQTLEAKYVMPDLVGQI
QTKTGLAKSTVARILLDSGRLGEALNNPQAFVDLAAEIVNVVKREFLVYGDGSEGSGVRY
LKLEGDVYAMRRFENDDLMGVFASNVVAVGKQEKTLFSHIVIDSNSSPERLFAQACEDND
DVLFYIKLPRWFQIETPVGPYNPDWALAYRNDQILYFVAETKKTGGDRVQLDLLRPIEDL
HIECGKRHFRNFEEVRFRVVASLAELVG
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaaactccaattcgacgccaaccaggattatcaactcactgccatccgcgccgtggtg
gatctgttcaaggggcagccggatgcctcgcagaccgccgtgacgcgggatgacgcgctc
tccagtctgaatctgaccgagaccggcgtggcgaaccgccgtgtcatcgacgcggcgcag
tggctgaagaatctgcgcgccgtccagaacgcgcacgacatcgagccttcgccgaccctg
gagccgatgcgcttggacgacggtacgccagtcggcacgtttcctaacttcaccgtcgag
atggagaccggcaccggcaagacctacgtctatctgcgtacgatccacgaattggcgaag
acctacgggtttcggaagttcgtcatcgtggtgccctcggtggcgatccgcgagggggtg
ctgaagagcctcaagatcaccagtgaccatttccagatgctgtacgactatgcgcgagcc
gagttcatggtctacgactcgaccaaggtcaaccagctccgccatttcgccctgtcggac
gcgatccagatcctggtgatcaacatcgacgccttcgccaaggactcgaccccggcggag
cgtccgcaaccggccggcaagtcgcgcaagaagccgtcaaagggcaacgtcatcaaccag
gtgcgcgagactgggatcgcgccgatccaattcatccaggacagccatccgatcctgatc
ctggacgagccgcagaatctggagaccgatctgcgcaagcaggccattacgcggctcaat
ccactctgcgcgttgcgctactcggccacccatcgcaacacttacaacctgatccattcg
ctcgatccggtgcgtgcctacgaactggggctggtcaagcagatcggcgtggattcggtg
atcgcgctcaaggatgccaatcaggcgttggtcgagatcgcgggcttcaacaccggcaag
cgcagcgtctcggccaagctgacgatctgggtcaatcaggctcagggaccgacgaagaag
accgtgacggtcagaaacggcgacgatctttacagcgtgaagttctccaaccagcgcgaa
atctatcgagacggttttatcgtcaacgagatcgacgtcggcgagggtgtcatcaccttc
gccaacgacgtgcgggtgcgtcttgggcagccgcatggcgccctcaccgataccattctg
cgtctacagatcgagacgaccgtgcgtcgtcatttcgagaaggcgcgacggctgcatccg
ctgggcatcaaggtgctctcggtcttcttcatcgaccgagtggccaactatcgcgcccat
ggcgaggatggcgcgacatccaagggcaagttcgcagtctggttcgaggacatctacgcg
cagttccgcgcggaccccgactatctcggattgatgccgcacgcgccggagcgggtacat
aatggctatttttcgcaggacaagcgcgccgtctcgcccttcgagaccctgaccggcaag
agcaacgccgacgcggaggccagcgccttcgagctgatcatgcgcgacaaggagcgcctg
ctggatctggatgagccgctcgccttcatcttcagccattccgcgctgcgcgagggttgg
gacaatcccaatgtcttccagatctgcaccctggccgagtccagttcggacctcaagaag
cggcaggagatcgggcgcgggctgcggctgtgcgtgaatcaggagggcgaacgggtccgc
gaccgaggcgtgaatcgtttgacggtcatcgccaacgagagctatgaggacttcgccaac
cagttacaggcggagatgaccgaggccggcgtgcgattcaagcccgagatggtccagaac
gagcgcgataaagtcgccgtgcggctcaagaaaggctacgacaccgaccgccgttttctg
gatctttgggagcggatccgggcgtgcacccggtaccaggtccagtacagcactgccgag
ctgacggccaaggccgcgcgacggatcagggacaagctgcccatgatcgagcggccccga
gtggcggtcatccgtgccgacatggccatcggcgcctcgggggtgagcggaacggaaacc
ggccgtcgcacccagaccctggaggcaaaatacgtcatgcccgatctggtcggccagatc
cagaccaagaccgggctggcgaaatcgaccgtggcgcgcatcctgctcgacagcgggcgg
ctcggcgaggcgctcaataacccgcaagccttcgtcgatctggcggcggagatcgtcaac
gtggtcaagcgcgagttcctggtctatggcgatggctcggagggcagcggggtgcgatac
ctgaagctggagggcgatgtctacgcaatgcgacgcttcgagaacgacgacctgatgggc
gtgttcgcgtccaatgtcgtcgcggtcggaaagcaggagaagacgctcttctcgcacatc
gtcatcgactccaattcgagccccgagcggctgttcgcgcaagcctgcgaggacaatgac
gacgtgctcttctacatcaagctgccgcgctggtttcagatcgaaacgcccgtcggaccc
tacaacccggattgggcgctggcctaccgcaacgaccagatcctgtacttcgtcgccgag
accaagaagaccggcggcgaccgtgtccagctcgatctgctgcgacccatcgaggatctg
catatcgaatgcggcaagcgacacttcaggaacttcgaggaagtccgcttccgggttgtc
gcgtcgctggccgagttggtgggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system