KEGG   Thioalkalivibrio versutus: TVD_11310
Entry
TVD_11310         CDS       T03959                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
tvr  Thioalkalivibrio versutus
Brite
KEGG Orthology (KO) [BR:tvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tvr03009]
    TVD_11310
Enzymes [BR:tvr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     TVD_11310
Ribosome biogenesis [BR:tvr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TVD_11310
SSDB
Motif
Pfam: PseudoU_synth_2 S4 ThiS
Other DBs
NCBI-ProteinID: AKJ95905
UniProt: A0A0G3G3V6
Position
complement(2453166..2454125)
AA seq 319 aa
MSEPREAHLPEEAAGQRLDAALAQLFPEYSRSQLTQWLKEGALRVDGASPRPRTPVRGGE
RVELIAPDAPVLAAQPEAIALDVLYEDAAVLVINKPAGLVAHPAAGHRDGTLVNALLHHA
PELAQLPRAGVVHRLDKDTTGLMVVARTPEAQTALVRQLQARSVHREYRALVQGRVISGA
TIEEPIGRHPVDRKRQAVTGGGKPAVTHYRVAERFPAHTLLNVRLETGRTHQIRVHMAHI
RHPIVGDLTYGGRPRPVKGMGEAAKATVAAFKRQALHAARLEFEHPTSGEPCAFEAPLPE
DFEGLLAALRADARETGDA
NT seq 960 nt   +upstreamnt  +downstreamnt
atgagtgaaccgcgtgaggcccatctgccggaggaggcggccgggcagcgcctggatgcc
gcgctggcgcagctgttccccgagtattcgcgcagccagttgacccagtggctgaaggag
ggcgcgctgcgggtggacggcgcctcgccgcgcccgcgcacgccggttcgaggcggcgag
cgggtggaactgatcgcgccggacgccccggtgctggcggcgcagcccgaggccatagcg
ctggatgtcctgtacgaggatgcggcggtgctggtgatcaacaagccggccgggctggtg
gcccacccggcagccgggcatcgcgacggcacactggtcaatgccctgctgcaccacgcc
ccggagctggcgcagttgccgcgcgcgggcgtggtccaccgcctggacaaggacaccacc
ggactgatggtggtcgcgcgtaccccggaggcgcagaccgccctggtgcgccagttgcag
gcgcgcagcgtgcaccgtgagtaccgcgcgctggtccagggtcgggtgatcagcggtgcc
accatcgaggagccgatcgggcgccacccggtggatcgcaagcgccaggcggtgaccggc
ggtggcaagcccgcggtcacgcattaccgcgtggccgaacgcttccccgcccataccctg
ctgaacgtgcgtctggagaccggccgcacccaccagatccgcgtacacatggcgcatatc
cgccacccgatcgtgggcgacctgacctacggcggacgcccgcggccggtcaagggcatg
ggtgaggcggccaaggccacggtggcggccttcaagcgtcaggccctgcatgcggcgcgc
ctggagttcgagcacccgaccagcggcgaaccctgcgcgttcgaggccccgctaccggag
gacttcgagggcctgcttgcagccctgcgcgccgatgcccgggagaccggtgatgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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