KEGG   Trametes versicolor: TRAVEDRAFT_143594
Entry
TRAVEDRAFT_143594 CDS       T04795                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
tvs  Trametes versicolor
Pathway
tvs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TRAVEDRAFT_143594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvs03021]
    TRAVEDRAFT_143594
Transcription machinery [BR:tvs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     TRAVEDRAFT_143594
 Prokaryotic type
  Archaeal type
    TFB
     TRAVEDRAFT_143594
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Guanylin RB_B Cyclin_N
Other DBs
NCBI-GeneID: 19409342
NCBI-ProteinID: XP_008035530
JGI: 143594
Position
Unknown
AA seq 351 aa
MAYSQPFPLAQPIQKVQQPTFGPDLAVRLICPECRDPNPNIVEEFSSGDLVCGTCGLVLG
DRIVDTRSEWRTFANDEGDDPSRVGAASDPLMEGMEQLDTTISFRDGGSGIARELQRAAS
RSAASRSERNLLQAFRDIAGWCDQFSLPKTISDIAKQLYKRSDEEKLLRGKPLEAVIAAC
IFIACRQAHVPRTFREICNLTHVSKKVLGQCYKALEQAFNLTPGASQDRHLNAPSGTTGA
EDLLVRYCNHLDLPPNVQPICGDIIVKARELGIADGRSPVSIAGGAIYFTCCLLDKPKSV
KEISTVAGVSEGTIKLVYRLYYAEKEKLVKEEWIRDGKAKLERLPVESGSK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcctactctcagccgttccccctcgcacaacccatccagaaggtgcagcagccgaca
ttcggcccggaccttgcagtccgtctcatctgccctgaatgtcgtgacccgaacccgaac
atcgtcgaggagttcagcagcggagatctggtctgtggcacttgtgggctagtgttgggc
gacaggatcgtcgacacaaggagtgagtggcggacgttcgcaaacgacgagggcgatgac
ccttcgcgtgtcggagcggcatctgaccctctcatggagggcatggaacagctggacacg
accatttcgttccgggatggtggttctggcatagcgcgcgagctgcagcgcgcagcatct
cgttcggcggcgtcgcgttcggagcgaaatctcctgcaggcattccgcgacatagccggc
tggtgcgaccagttctccctccccaaaaccatctccgacatcgcgaagcagttgtacaag
cgatcggacgaggagaagctacttcgtggcaagccgctcgaagctgtcatcgcggcgtgt
atcttcattgcctgccgacaagcgcatgtaccgcggacgttccgcgaaatctgcaatctc
actcacgtcagcaagaaggttcttgggcaatgttacaaggccctcgagcaggccttcaac
ctcacaccaggcgcgtctcaggaccgccacctgaacgcccctagcggtacgaccggtgcc
gaggacctcctggttcgttactgtaaccacctcgatctcccgcccaacgtccaacctata
tgcggggacatcatcgtcaaggcccgcgaactgggcatcgcggatggtcgttcgcccgtg
tctatcgccggcggcgcaatctacttcacctgctgcctcctcgacaagccgaagtccgtc
aaggagatcagcacggtcgcgggagtcagcgagggtacgatcaagctggtgtatcgcctc
tactatgcggagaaggagaagttggttaaggaggagtggatcagggacgggaaggcgaag
ttggagagactgccggtggagagcgggtcgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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