KEGG   Trametes versicolor: TRAVEDRAFT_162564
Entry
TRAVEDRAFT_162564 CDS       T04795                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
tvs  Trametes versicolor
Pathway
tvs04111  Cell cycle - yeast
tvs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TRAVEDRAFT_162564
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TRAVEDRAFT_162564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvs04121]
    TRAVEDRAFT_162564
Ubiquitin system [BR:tvs04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     TRAVEDRAFT_162564
SSDB
Motif
Pfam: WD40 F-box-like ANAPC4_WD40 NBCH_WD40 F-box Nup160 SWIM
Other DBs
NCBI-GeneID: 19410525
NCBI-ProteinID: XP_008035391
JGI: 162564
Position
Unknown
AA seq 653 aa
MPIIPPPTPAPSPPPQQSSFPSPSLATFTHISAFAGLTPAARRQHLYALIQECTPSELLF
LSTTIAPLLKRDFLRALPPEVSLHILSFIDDPRTLARAALVSRYWNELLKDEFLWKTMAI
RHGFSRDAEAVESYRREQLLDGAPPVASDPLPSGSGAEARRSPLFSPRGLQPPRPQSVDF
PYRKFFIHEYIRTSNWLGKGKLLRIHRALLHPPPPDPNMPGQLAPPATAQQQGQDQGPLA
NPAIPTSMAIDAQWVVVGLANSRIHIFSARTGVLSRTLIGHDSGVWAVALISEGGQPVGR
DPCMHPCEGDPLVASHPQDEALPLALRTAVGLDKSTNISKVRLRPRSVPDPFAEGGKAER
PRFGKPSYPGGASDGWGQPSALVVSGGCDKELRVWDVKTGYCIYTLRGHTSTIRCLKVVH
GRPLAVSGSRDRTVRVWDVQRGRLLRVLEGHTQSVRCLDVCGNRIVSGSYDCTCRIWDVD
TGACLHVLRGHFHQIYTVAFDGERIASGGLDTTVRVWDASNGACLALLQGHTALVCQLQL
TPTMLATGGSDGRVITFSLTGSAFLAVQRLAAHDSSVSGLQLDERFLVTSGNDGRVRLYE
FERGAQGDAQCRFVRDMCEPSESVWKVAYTRETCAVLSKKAGKMVVEIWSFKP
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcccatcataccgccgcccacccccgccccatcgccacccccgcaacaatcttcattc
ccgagcccgagcctcgcgacgtttacacacatctccgccttcgccggcctaacccccgcc
gcacgacggcagcacctctacgccctcatccaggaatgcacaccatcagagctcttgttt
ctttctacgaccatcgcgccactcctcaagcgcgacttcctccgagctctcccgcccgag
gtatcccttcacattctgagctttatcgatgacccccgcacgcttgctcgtgctgcactt
gtcagcaggtactggaatgagcttttgaaggacgaattcctgtggaagacgatggcaata
cgtcacggtttctcgcgagacgcagaggcggtggaatcgtaccgccgggagcagttgctc
gatggcgctcctccagtagcaagcgaccccctgccgagcggctcgggagcggaggcacgc
aggagcccgctattctcaccaaggggactccagccgccccgcccacagagcgtcgacttc
ccataccgcaagttcttcatccacgaatatatccgaacgtcgaactggctcgggaagggc
aagctcctgcgcatacaccgcgccctgctgcacccgccgcccccggaccccaacatgccc
gggcaactcgcgcccccagcgacggcgcagcagcaagggcaggaccagggcccactcgcg
aatcccgcgatcccgacgtcgatggcgatcgacgcgcagtgggtcgtcgtcgggctcgcg
aacagccgtatccacatcttcagtgcgcgcacgggcgtgctcagccgcacgctcatcggg
cacgactccggcgtgtgggcggtcgcgctcatttcggagggtgggcagccggtgggccgc
gatccgtgcatgcatccgtgcgagggcgacccgctcgtggcgagccacccgcaggacgag
gcgctcccgctggcgctgcgcacggctgttgggctggacaagtccactaatattagcaag
gtgcgcttgcggcccaggagcgtccccgatcccttcgcggagggcggcaaggcggagcgt
ccgcgcttcggaaagccgagctaccccggaggtgcttcggatggctggggtcagcccagc
gcgctcgtagtgagcggtggatgcgacaaggagctccgtgtttgggacgtgaagacgggg
tactgcatctacacccttcgcggccacacgtctacgatccgctgcctgaaggtggtgcat
ggacgaccactcgccgtatcaggctcgcgcgatcggaccgtacgcgtgtgggacgtgcag
cgtgggcgccttctacgcgtgctagagggccacacgcagagcgtgcgctgtctcgacgtg
tgcggcaaccggatcgttagcgggagttatgactgcacctgccgcatatgggacgtggac
accggcgcatgtctgcacgtcctgcgcgggcactttcaccagatctacacggtcgcgttc
gacggcgagcgcatcgcgagcgggggactggacaccaccgtccgggtgtgggacgcttcg
aacggcgcgtgtctcgcgctactccaagggcacaccgcactcgtctgccagctccagctc
acgccgacgatgctcgcgacgggcggctcggacgggcgcgtgatcacgttctcgctcacg
gggagcgcgttcctcgccgtgcagcggctcgcggcgcacgacagctccgtgtcgggcctg
cagctcgacgagcgcttccttgtcacgagcgggaacgacgggcgcgtgcggctgtacgag
ttcgagcgcggcgcgcagggcgacgcgcagtgccgcttcgtgcgcgacatgtgcgagccg
agcgagagcgtgtggaaggtcgcgtacacgcgcgagacgtgcgcggtgctcagcaagaag
gcgggcaagatggtcgtcgagatctggagcttcaagccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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