KEGG   Trametes versicolor: TRAVEDRAFT_62354
Entry
TRAVEDRAFT_62354  CDS       T04795                                 
Name
(RefSeq) NUC189-domain-containing protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
tvs  Trametes versicolor
Pathway
tvs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TRAVEDRAFT_62354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tvs03009]
    TRAVEDRAFT_62354
Ribosome biogenesis [BR:tvs03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TRAVEDRAFT_62354
SSDB
Motif
Pfam: Utp12 WD40 Nup160 UTP15_C
Other DBs
NCBI-GeneID: 19418404
NCBI-ProteinID: XP_008032488
JGI: 62354
Position
Unknown
AA seq 784 aa
MAPSPQKSKKSRTKPPRGRPAATSAISQPAVEDATTSTYLSSFSPDGQLFAFLSLAVDKH
ALKVYDTSTRRSVAEHVVDAARVTSLCWARLDLAEGQGKGAEDEDASRKSKRKKRSSLSA
GAAAPGAAAPQLVVLGLSDGSLLLFSPSHGRLLRTLSDPSSSTAVLAVAGQETESGDPHT
LWTSSSDGALRLWNARTNQVAQSHFSDDRIPYTALSVRKSEEEDVVEVLAAHHSIHLLAV
SSDTRKPKTLAKFTGHASPVSALAWVDSARFLSVASADRFVNVWELPTAPKTEGKIIATI
PLDSDARAVHLANPPSADSPAQRLLFALSAAGKVAVFTLTSDLATSSPSKGKSAIPSLSP
KSVISPSSKKNAAALSVLAVSSVDDAAGRLRVASVSGGVQLAFDIVEYRDQSGHFVPDVS
VTVATAAAAVGQTDGKDGLGAPNKRYNEAAGLAVGTGAEIGQDREQDDLVMRDIDGALDA
DLAELSLGQRLTAVQGVDSRAPGSDSESEAEDAAVPNGKPRKGAPDDAVPASSLTRTLIQ
ALHSSDSRLLETCLAHSDPTLIRNTVRRLPPQLAVPLVTACVERLSRGARGNNMKGGGGG
ASSQRGTALINWVKAVLTTHSGHLMTMPDLVARLSGLHATLTQRLTLQESLLSLSGRLDM
VISQIEMRSSGPPAPLPMPKNRRGQNKQAKAREARRYVEGESDDEDEEKMEVAVESADEE
GSVEDVELGGDSSESEGEGDSVEGSDSDDEDEDSDDDGDDPTMGGFIDDEAEEYSEDEDE
DESE
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggctccctcaccgcaaaaatccaaaaagtcccgcacaaaaccgccgcgcggacggcct
gcagcaacttctgccatctcgcaacccgcggtcgaggatgccacaacctctacctacctc
tcctcgttctcgccagatgggcagctcttcgctttcttgtcattggcggttgacaagcat
gccctgaaagtatacgacacctcgacacggcggtcggtcgcagaacatgtcgtagacgcg
gcgcgcgtaacttctctgtgctgggctaggctcgacctcgcggaagggcaggggaagggt
gcggaggatgaggatgcgtcccggaaaagcaagcggaagaagaggagtagcctctcagcc
ggtgctgcggctcctggcgctgcagcaccccagctggtagtgcttggtctctcggacggt
tcgctccttctcttctcgccttcccatggcaggctgcttcggacactttcggacccttcc
agttccactgctgtccttgctgttgctggtcaggagacggagtcgggggacccacacact
ctctggacgtcaagctcggacggtgctctccgcctctggaatgcgcggacaaaccaagtc
gcccagtcgcatttcagcgacgatcgaataccatatactgcgctctctgtacgaaaatca
gaggaggaagatgtagtcgaagtcctcgccgcacaccactcgatacacctcctcgcagtg
tcctctgatactcggaaacccaaaacactagccaagttcaccgggcacgcctccccagta
agcgcattggcatgggtggactctgcccgtttcctctctgtcgcatctgcggaccgcttc
gtgaacgtctgggagctaccaaccgctccgaaaaccgaaggcaaaattatcgctaccatt
cccctcgactccgacgctcgtgcagtccacttagccaacccgccatctgccgactcgcct
gcgcaacgactattgttcgcgttatcagctgcaggcaaggtggccgtcttcactcttacc
tccgacttggcgacgtcaagtccctcgaagggcaagagcgcaatcccctcactcagcccc
aagtcggtcatttccccttcctccaagaaaaatgctgcggcattatccgttctcgcggtg
tcgtctgtagatgatgcggctggccgtctacgcgttgcgtctgtgagcggtggggtgcag
ctcgcgtttgacatagtggagtaccgcgaccagtctgggcacttcgtccctgatgtttcg
gttaccgtcgccactgccgccgccgcagtgggtcagacagacggcaaggacggtcttggc
gcgccaaacaagcggtacaatgaagcagcaggtcttgctgtgggtactggagccgagatc
ggacaagaccgcgagcaggatgacctcgttatgcgcgacattgacggcgccctcgacgca
gatcttgcggagctcagccttggtcagcggctaacagccgtccaaggcgtagactcccgc
gcgcctggctctgactcggagtccgaggctgaggacgccgccgtgcctaatgggaagccg
cgtaaaggcgcaccggatgacgcggttcctgcaagctcactcacgcgcacactcatccaa
gctctccattcgtcggactcgcgtttgctggagacgtgtcttgcgcattcggaccccacg
ctcatccggaataccgtccgcagactgccaccgcagctcgcagtcccgctggtcaccgcc
tgcgtggagcgattgagccgaggcgctcgaggcaacaacatgaagggaggcggagggggc
gcgagctcccagcgcggtaccgccctcatcaactgggtgaaagcggtcttgaccacacac
agtggccatctcatgactatgccagacctggtcgctcggctatctggcctgcacgcaacg
cttacccagcggttgacgctgcaagagagcctactctcgctcagtggtcgtctcgacatg
gtcatttcgcaaatcgagatgcgctcctcgggtcccccggcacctcttcctatgcctaag
aacaggcgcgggcagaacaagcaagcgaaagctcgtgaggcgcgccggtatgtcgaaggc
gagagcgacgacgaagatgaggagaagatggaggttgcggtcgagagcgccgatgaggag
ggtagtgtcgaagacgtcgagctcggcggcgacagctcggagagcgagggtgagggcgac
tccgtcgagggctccgactccgacgatgaagacgaggactcggacgacgatggcgacgat
cccactatgggcggcttcatcgacgacgaagcggaggagtatagcgaagatgaggacgag
gatgaaagtgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system