KEGG   Thermoanaerobacter wiegelii: Thewi_1942
Entry
Thewi_1942        CDS       T01607                                 
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
twi  Thermoanaerobacter wiegelii
Pathway
twi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:twi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Thewi_1942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:twi03400]
    Thewi_1942
DNA repair and recombination proteins [BR:twi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Thewi_1942
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Thewi_1942
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_23 AAA_29 AAA_16 RsgA_GTPase nSTAND3 DnaJ_CXXCXGXG AAA_22 AAA_18 nSTAND1 RNA_helicase AAA_14 ATPase_2 APS_kinase AAA_33 NACHT Viral_helicase1 cobW MMR_HSR1 SLFN-g3_helicase BCA_ABC_TP_C PRK NTPase_1 T2SSE NB-ARC MeaB
Other DBs
NCBI-ProteinID: AEM79322
UniProt: G2MRG0
Position
complement(1954296..1957079)
AA seq 927 aa
MVKDKIVIKGARVHNLKNIDLEIPRDKLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDYIEGLSPAISIDQKTTNKNPRSTVGTITEIYDYLRLLYARAGIP
HCPVCGKEISMQTIDQMVDRVKELPEGTRIQVLAPVIRGRKGEYAKLLNDIKKSGYVRVK
IDGVMYDVNEEIKLDKNKKHTIEVVVDRIIIKPGIDMRLTDSIETALKLADGIVTIDVID
GESFTLSEKYACTECNISIEELSPRMFSFNSPYGACPVCTGLGEFMKVDPELLIQDPKKS
LANGLLPGIVASQDSYAYYNILRLIEHFGYTENTPYEKFSEDLKNVLLYGKDTKGKSYGF
EGIVNNLERRYNNTSSDFIKEEIEKYMRPVTCPACHGARLKPEALAVTVGGLSIKEMTDL
SVGELIKFIDQLKLTERHEIIAKPILKEIKARLNFLVDVGLDYLTLSRPAATLSGGEAQR
IRLASQIGSGLVGVTYILDEPSIGLHQRDNERLINSLKKLRDQGNTLIVVEHDEDTIYAA
DYIVDVGPGAGEHGGEIVVAGTIEDVLKCEKSITGQYLSGKIKIEVPKQRRKPNGKALIV
KGAKENNLKNIDVVFPLGVFICVTGVSGSGKSTLINEILYKALAQKIYKSKDKPGMHDAI
EGIDNIDKVINIDQSPIGRTPRSNPATYTGVFDYIREVFANTPEAKMRGYKPGRFSFNVK
GGRCEACGGDGIIKIEMNFLPDVYVPCEVCKGQRYNRETLEVKYKGKNISDVLNMTVEEA
LEFFENIPRIKNKLMTLYDVGLGYIRLGQPSTQLSGGEAQRVKLATELSKRPTGKTLYIL
DEPTTGLHFADVHRLLDVLNRLTDAGNTVIVIEHNLDVIKSADYIIDLGPEGGDKGGMVI
ATGTPEEVAANENSYTGHFLKKVLSQK
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggtgaaggacaaaattgtaattaaaggggcaagagttcacaatttaaaaaatatagat
ttggagattccacgagataaattaactgtgataacgggtttatcaggctctggcaagtct
tctcttgcctttgataccatttatgccgaaggtcagaggagatatgtggagtctttgtct
gcttatgcaaggcaatttttaggacaaatggataaaccagacgttgattatatagaagga
ctttcaccggcaatatctatagaccaaaagaccacaaataaaaaccctcgttctactgta
ggtacgataactgagatttacgactatctaagacttttatatgcaagggctgggatcccc
cattgtcctgtttgcggaaaagagattagcatgcaaactatagatcagatggttgacaga
gtcaaagaattgccagaaggtacaaggatacaggtactggctcctgttattagaggaaga
aaaggggaatatgctaaacttttaaatgacataaaaaagagtggatatgtcagggtaaaa
attgatggggtcatgtacgatgtaaatgaggaaattaagcttgacaaaaataaaaagcat
actattgaagtcgtagtagataggattattataaaaccgggaattgacatgaggctgacg
gattctatagaaacagctttaaaattagcagatgggatagttactattgatgtaatagac
ggagaaagctttacactctctgaaaaatacgcttgtacagagtgcaacataagtattgag
gagctttctccgagaatgttttccttcaatagcccttatggggcttgtcctgtttgcact
ggattgggagaatttatgaaggtagatccagagcttttaatacaagaccctaaaaaatca
ttagcaaatgggttgttgccggggattgttgcttcacaggatagttatgcttattacaac
attttaagattgattgaacattttggatatacagagaatactccttatgaaaagtttagt
gaagatttaaaaaatgtactgctttatggcaaagatacaaaaggaaagtcctatggattt
gaagggatagtaaacaatcttgaaagaaggtacaacaatacttcttcagattttataaaa
gaagagatagaaaagtatatgagaccggttacttgtcctgcatgccatggagcaagatta
aagccagaagcgttagctgtgactgttggtggactttccataaaagaaatgacagacctt
tctgttggcgagcttataaaatttattgaccaactcaaattaacagaaagacatgagatt
attgcaaagccaattttaaaagaaataaaagcaaggcttaattttcttgtagatgtagga
cttgattatttgactctgtcaaggcctgcagctactttatcaggtggagaagcacaaagg
ataagattggcaagccagataggctctgggcttgtaggagttacatacatcttggacgag
cccagcattggacttcatcaaagagataatgaaaggcttataaattccttaaaaaaatta
agagaccaaggcaatactcttatagtagtagagcacgacgaagatacaatatatgcggca
gactacattgtggatgtaggaccaggtgcaggtgagcatggaggagaaattgtagttgcg
ggtacgatagaagatgtgttaaaatgtgaaaagtcaattacaggacagtatttaagtggc
aaaataaagatagaagtgccaaaacagaggagaaaacctaatggaaaagctttaatagtg
aaaggagctaaggaaaacaatttaaaaaatatagatgtggttttccctcttggagtattt
atatgcgttacaggggtttctggctcaggcaaaagcacccttataaatgagatactgtac
aaagcattggcacagaagatttataagtccaaagataaaccaggtatgcacgatgcaata
gagggtatcgataatatagataaagtaataaatattgaccagtctcctataggcaggact
cctcgttcaaatcctgctacctatacaggagttttcgactatataagagaggtttttgca
aataccccagaagctaaaatgagaggttataaaccagggagatttagttttaatgttaaa
ggtggaaggtgtgaagcctgcggaggagatggcataattaaaattgagatgaactttttg
ccggatgtgtatgtcccttgtgaggtctgcaaagggcaaaggtataatagggagacattg
gaagtaaaatataaaggaaaaaacatttcggatgtacttaatatgacagtagaagaagca
ttagagttttttgaaaatatacctagaataaaaaataaattgatgactttgtatgatgta
ggactaggatatattaggctagggcaaccttctactcagctttcaggaggagaagcccaa
agagtaaaattagctactgaactttctaaaagacctacaggtaagacattatatattttg
gatgagcctacgactggattacattttgcagatgttcataggcttcttgacgttttaaat
agattaactgatgcaggtaatactgttattgtaattgaacacaacttagatgtcataaaa
agtgcagactatattattgacttaggaccagaaggtggagacaagggtggaatggtaata
gctacagggacacctgaagaagttgctgctaatgagaattcttatacaggccattttttg
aaaaaagtcctttctcaaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (38)   

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