KEGG   Tropheryma whipplei TW08/27: TW116
Entry
TW116             CDS       T00117                                 
Symbol
ssb1
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
tws  Tropheryma whipplei TW08/27
Pathway
tws03030  DNA replication
tws03430  Mismatch repair
tws03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tws00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TW116 (ssb1)
   03430 Mismatch repair
    TW116 (ssb1)
   03440 Homologous recombination
    TW116 (ssb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tws03032]
    TW116 (ssb1)
   03400 DNA repair and recombination proteins [BR:tws03400]
    TW116 (ssb1)
   03029 Mitochondrial biogenesis [BR:tws03029]
    TW116 (ssb1)
DNA replication proteins [BR:tws03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TW116 (ssb1)
DNA repair and recombination proteins [BR:tws03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     TW116 (ssb1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    TW116 (ssb1)
Mitochondrial biogenesis [BR:tws03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    TW116 (ssb1)
SSDB
Motif
Pfam: SSB tRNA_anti-codon FGGY_N
Other DBs
NCBI-ProteinID: CAD66799
UniProt: Q83NU2
Position
complement(125457..126017)
AA seq 186 aa
MDATVTVVGNLTADPELRYTATGAAVVNMTIASTPRMYDRQSGEWKDGEPLFLRGILWRE
YAINAAASLAKGMRVVAVGKLKQRNYETREGDRRTSVELEIDEIGPTLRYATAKCSRATQ
AGHGVSPDPWADSQTGQGIDSHTTRSEEITENAKNGEGAGKNELNKKVLVGDNVSYEDFD
SDEVPF
NT seq 561 nt   +upstreamnt  +downstreamnt
gtggatgcaaccgttaccgtggtgggcaatctaacagccgatccggaattgaggtacacc
gcaactggggcggctgtcgtcaacatgaccatagcaagcacccctcgcatgtacgacaga
cagtccggcgagtggaaggatggggaacctctttttcttcgtggcattctgtggagagag
tatgccattaatgccgcggcctcccttgcgaagggaatgcgagttgtagctgtcggtaag
ctaaagcagcgaaactatgaaacgagagagggtgatcgcagaacttcggttgagcttgaa
attgatgagattggcccgactttgcggtacgcaacagcgaaatgctcgagggccacgcag
gctgggcatggtgtgtctcctgatccttgggctgactctcagactggtcagggtattgac
tctcacaccacacgtagtgaggaaattactgaaaacgcgaagaatggcgagggtgccggg
aaaaacgagttaaataaaaaagttctggtgggagataatgtatcttatgaggattttgac
agtgatgaagttcctttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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