KEGG   Tropheryma whipplei TW08/27: TW323
Entry
TW323             CDS       T00117                                 
Symbol
xthA1
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
tws  Tropheryma whipplei TW08/27
Pathway
tws03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tws00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TW323 (xthA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tws03400]
    TW323 (xthA1)
Enzymes [BR:tws01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     TW323 (xthA1)
DNA repair and recombination proteins [BR:tws03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TW323 (xthA1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CAD66996
Position
355281..356120
AA seq 279 aa
MRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVDAFRDAGYYSEAHGLR
GFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISATTGGIRLYSLYVPNGR
EVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVTCEQDTADPDFQLPNDIT
CSGPEREAFQAILDTGMFDLIRPFAPIGFTSWSYQRQRFQNNQGLRIDFMLGSDSVQRRT
IWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD
NT seq 840 nt   +upstreamnt  +downstreamnt
gtgcgcgtcggtacatggaatgtcaattcaattagggcacgtcttgaacgtgttttggct
tggcttaaaaatgaatgcattgatgttgctgccctacaggagactaaggtcagaactggg
gattttcctgtcgatgcctttagagacgcgggatattattctgaagctcatggccttagg
ggatttgagggcgttgcaattgttagcaggttcccgattagaagggttacggttaacatt
cctcgtgcacccggattcttgagtgaccgctggggtacggatattccgcaggaggctcgg
gcaatttccgcaacgactggtggtattcgtttgtatagcctgtacgttcccaacggaagg
gaagtcggctccccgcactttgagtataagctcgcatggcttaaagctcttgcatctcat
gtcaggactgttcttagaagaactccaggcattcctctaatgcttgttggggattttaac
atcgtcacctgcgaacaagatacagctgatcccgattttcagctgcctaatgacataacc
tgttcaggtcctgagcgtgaggcctttcaggccatccttgacacggggatgtttgacctt
atccgcccttttgccccaattggctttacatcctggagttatcagcgtcagcgttttcag
aataaccaaggcctcaggatagatttcatgctcgggtctgattcagtccaaagaaggact
atttggggtgaaatcgatcgggtgcagagaaggcatctttttggccttactcccagtgat
cacgccccactggtgtcggttattgatccccctaggcggacatttcgcagagacgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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