KEGG T00117: TW715

Tropheryma whipplei TW08/27: TW715

Entry

TW715             CDS       T00117

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

tws Tropheryma whipplei TW08/27

Brite

KEGG Orthology (KO) [BR:tws00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tws03032]
    TW715 (topA)
   03400 DNA repair and recombination proteins [BR:tws03400]
    TW715 (topA)
Enzymes [BR:tws01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TW715 (topA)
DNA replication proteins [BR:tws03032]
Prokaryotic type
  DNA Topoisomerases
   TW715 (topA)
DNA repair and recombination proteins [BR:tws03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TW715 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4

Other DBs

NCBI-ProteinID:

CAD67374

Position

complement(808491..811016)

AA seq 841 aa
MKKLVIVESPTKVSSVGRYLGDGYVVMSSVGHIRDLPAPSGLTPDLKRSAHAQFAVNIEN
DFEPYYVVLENKKKVVEELQSALNNSDELLIATDGDREGEAIAWHLVQVLKPTVPVRRLV
FHEITREAIAYALQHPRPIDENLVDAQEARRILDRLYGYELSPVLWKKVRPGLSAGRVQS
PATRLLVDRERERINFKSAEYQAVTADFQVDSDVFSASLTLFGERKIATGRDFDNLANLK
TDALVLDKNLTDRILEELKSKGALDVEAIDSKPYSRNPYAPFITSTLQQDAAHKLGFSAK
RTMRTAQQLYEKGFITYMRTDSPRLSLQAISAARAQVELLYGREFLPDSPRTYGAKAKNA
QEAHEAIRPTGEVFERPESIESVLSVDCMRLYDLIWRRTIASQMVSARGETVTLTLSARI
PERSIFVLSGTVLHEKGFLKVYEGLQDLNSKLLPNLQVGDQVTLVDVRAVGHTTLPPPRY
TEASLVKVLEELGLGRPSTYALILRTIQERGYAHLRNRMLVPDWLAFSVVNLLENFFSRL
IDYDFTANLEDQLDEIALGSQNRSDWLRKFYFGDDNLPGLKEIISGAKDIDARAINSIPM
VGATLRVGRYGPYLEVGDKRFSIPHDVYPDALTPEKIHELVNQPESPVRELGAHPETGKL
VVLKSGRFGPYIEEVSDEKNVRRSSLFKNMDPEEVNLDVAVKLLEIPRVIGVNQENGEKV
IACNGRFGPYIKCGKETRPLDSEDDILSVTLDEALAILSAPKVRRSRVLMEFPTDDPVTR
RAVQIKSGRFGPYVTDGVTNATLDNTSWEDVTFDEAVSLLAEKRQRVDGDLDQETAEKIH
V

NT seq 2526 nt +upstreamnt +downstreamnt
atgaaaaaacttgttatagtcgagtcgccaaccaaggtatcgtcggttggtcgttacctt
ggtgacggttatgttgtcatgtcgtcagtagggcatattcgtgatttgcccgcccctagt
gggcttaccccagatcttaagaggtccgctcatgcccagtttgcagttaatattgaaaac
gattttgagccctactatgtcgtcctggagaataaaaagaaggtagttgaggagctacag
tcggccctgaataattcggacgagctccttatagcgacagacggtgatcgggaaggtgag
gcgatagcgtggcatttggtccaggttctgaagcctactgtgccggtgaggcgattggta
tttcacgagattactagggaagccatcgcgtatgcactacaacatccgaggccgattgat
gaaaaccttgttgacgcgcaggaggctcggagaattctggacagactctatggttacgag
ctatccccggtgctctggaaaaaggtaaggcccgggttgtctgccggtagagttcagtct
cccgctacccgacttctggtggatcgtgagcgtgaacggatcaacttcaagtcggctgaa
tatcaagcggtaacggctgactttcaggtggattccgacgtattctcagcttctttgacg
cttttcggtgagaggaaaatcgccaccgggcgtgactttgacaatttggcaaatctcaaa
acagatgctttagtactagataaaaatctaaccgatcgcatactcgaagagctcaaaagt
aagggtgctttggatgttgaagcaatcgattcaaagccgtatagcagaaacccttatgct
ccgtttatcacttccaccctgcagcaggatgccgcacataaactggggttctcagctaaa
cgaacaatgcgcactgcccaacaattgtatgaaaaagggtttatcacgtacatgagaacg
gactcaccacgtctgtctctacaagcgatttccgccgcgagagctcaggttgagcttctc
tacggaagggagtttctaccggattccccaagaacctacggggcaaaggcaaagaacgcc
caagaagcgcatgaggcgataaggcctactggcgaggtgtttgaaaggcctgagtcgata
gaatctgttttatcggttgactgcatgaggctttacgaccttatatggaggcgaacgatt
gcttcccagatggtatctgctaggggtgaaactgtcaccctgaccctctctgccagaatt
ccggagcgatctatttttgtcctgtccggaactgttctgcatgaaaagggtttcttgaaa
gtgtatgaagggttgcaggatctcaactctaagctattaccaaatttacaggtcggcgat
caggttacccttgttgatgttcgtgcggtcgggcacacaacccttccgcccccacgatac
accgaggctagcctggtaaaggtcctagaggagttggggctgggtcgcccatcaacatat
gcgcttattttgagaacaattcaggagcgcggctatgctcatctcaggaacaggatgctt
gttcctgattggcttgctttctctgttgtcaatcttcttgagaacttcttctctcgacta
attgattacgattttactgcgaacctcgaggatcagcttgatgagatcgcactcggctca
cagaatagatcggactggcttcgtaagttttactttggtgatgacaatcttcctggattg
aaggagataatttcaggcgcaaaagacatagatgcacgagcaatcaattcgatcccaatg
gtcggggcgactcttcgggtagggagatatggcccgtatcttgaagttggggataagaga
ttcagcattccgcatgatgtataccccgatgccttgactcccgaaaaaatacatgagctg
gttaatcagccagaatccccggtaagagaactcggcgctcacccggagaccggaaaatta
gttgtcttaaagtccggtcgctttggcccatatatcgaggaagtttcggatgagaaaaat
gtcagacgatcaagtctgttcaagaacatggatccagaggaagttaacttagatgtggct
gttaagctgctggaaatacccagagtcattggggtcaaccaagagaacggagaaaaggtt
attgcttgtaacggtcgctttgggccatatataaaatgtggtaaggagacacgtccccta
gacagtgaagatgacattctctcggtgacgcttgacgaggcattagccatcctgtccgca
ccgaaagttaggcggtcacgtgttcttatggaatttccaacggatgatccggtcacaagg
cgcgcagtgcaaatcaagtccggtcgctttgggccatatgtaacagatggcgttacaaat
gcaactttggacaatacatcgtgggaggatgtgacgtttgacgaagctgtgtccctgctc
gcggaaaagcgtcaacgggttgatggtgatcttgatcaagaaactgcagaaaagatccat
gtgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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