KEGG   Thalassospira xiamenensis: TH3_09820
Entry
TH3_09820         CDS       T03639                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
txi  Thalassospira xiamenensis
Pathway
txi03030  DNA replication
txi03430  Mismatch repair
txi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:txi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TH3_09820
   03430 Mismatch repair
    TH3_09820
   03440 Homologous recombination
    TH3_09820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:txi03032]
    TH3_09820
   03400 DNA repair and recombination proteins [BR:txi03400]
    TH3_09820
Enzymes [BR:txi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TH3_09820
DNA replication proteins [BR:txi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TH3_09820
DNA repair and recombination proteins [BR:txi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TH3_09820
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_25 AAA_16 AAA_22 AAA_33 AAA_14
Other DBs
NCBI-ProteinID: AJD52080
UniProt: A0A0B4XYZ7
Position
2107871..2108974
AA seq 367 aa
MAVDDQEENGTFPTPRRNGHFVGHDDAEKTILDAWNSKRMHHAWLLCGPRGVGKATLAYR
MARFVLSGGNEQGGGLFGDAPEGLHVDPENPVFRRIAGGGHGDLKVIERQYDEKKKRLQG
EITVDSVRTVGNFMSKTAAEGGWRIVIVDAADELNRNAANAILKVLEEPPANAMMILVAH
QPGKLLPTIRSRCRRLNLGVLEDHQVIDLLGRYCSDLDLDDRDALSGLAEGSIGRALQLH
DVGGLEFYTEMVRLLAALPDADVLAQHKFSERFSLADRDAAFATVTNLLHWWLGRLIRFA
ATGQAPREVITGELPAMQRMAAAQPLDQWIEVWEKISELMSATRGLHLDRKQALLNAFFM
LEETMRN
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggctgttgatgatcaggaagaaaacggtactttcccaacgccccgtcgcaatggccat
ttcgtaggtcatgacgacgctgaaaagaccattctggacgcttggaacagtaaacgcatg
catcatgcatggttgttatgcggcccccgcggggtcggcaaggcaacactcgcctatcgt
atggcgcgtttcgttctttctggtggcaatgaacagggcggcgggttgtttggagatgct
cccgaaggactacatgttgatcctgaaaaccctgttttccgtcggattgcagggggtggg
catggcgatctcaaggttattgaacgccagtatgacgaaaagaaaaagcgtctgcagggg
gaaattaccgttgatagcgttcgtacggttggcaatttcatgtcaaaaaccgctgccgaa
ggcggctggcggattgtcattgtcgatgctgccgatgaattgaaccggaacgcggccaat
gcgattctcaaggttcttgaagaaccgcctgcgaacgcaatgatgatcctggttgcgcat
caacccggcaagcttttgccgacgatccgatcgcgctgtcgccgtcttaatcttggtgtt
cttgaagaccatcaggtgatcgatcttctggggcgctattgctcggaccttgatcttgat
gaccgtgatgcgttgtctggtctggcagaaggcagtattggccgggcattgcaactgcac
gatgttggcgggcttgagttttataccgaaatggtccgtttgctcgcggcattgccggat
gcggacgtgctggcacagcataaattttcagaacggttttccctggcggatcgtgatgcc
gcctttgccacggtgacgaacctcctgcattggtggctcggtcgtctgatacgctttgcg
gcaacagggcaggcgccgcgcgaagtgattacgggggaattgcccgcgatgcagcgcatg
gccgctgcgcaaccgcttgatcaatggattgaggtgtgggaaaagatcagcgaactgatg
agtgccacgcgtggtttgcatcttgatcgcaaacaggctctgctcaatgcgttcttcatg
cttgaagaaaccatgcgaaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (79)   

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