KEGG   Ursus arctos horribilis (North American brown bear): 113252255
Entry
113252255         CDS       T05909                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
uah  Ursus arctos horribilis (North American brown bear)
Pathway
uah04137  Mitophagy - animal
uah04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113252255 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    113252255 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:uah04121]
    113252255 (AMFR)
Enzymes [BR:uah01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     113252255 (AMFR)
Ubiquitin system [BR:uah04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113252255 (AMFR)
  Multi subunit Ring-finger type E3
   ERAD complex
    113252255 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    113252255 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-ANAPC11 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 113252255
NCBI-ProteinID: XP_026350570
Position
Unknown
AA seq 643 aa
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGPGEPESPTAPVQTEPAVP
ARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLVAMLLSCCGLAVVCCVTGYTHGVHTLAFMAAESLLVTVRTAHVILRYVIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDQQGDNLDENLVPVAAAEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QLTRSVEITTDNILEGRIQVPFPTQRSDGIRPALNSPMERPNGDQEEGEASVQTERVPLD
LSPRLEEALDLSEAEVEAGEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLNR
SSEVDAASESCPLSEGTTSDPVTLRRRMLAAAAERRLQKQQLS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgccgctgctcttcctggagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccctgctcggcaccatcgtcagcgcctaccgcgccctcagccagcccgag
gccgggcccggggagccggagtcgccaacggccccggtgcagacggagccggccgtgccc
gcccggcccagcgccggcggcccccgggcccgcgatgtggcccagtacctgctctcagac
agcctgttcgtgtgggttctggtaaatactgcatgctgtgttttgatgttggtggctaag
ctaatccagtgtatcgtgtttggccctcttcgagtgagcgagaggcagcacctcaaagac
aagttctggaattttattttctacaagttcattttcatttttggtgtgctgaatgtgcag
acggtggaagaggtggtcatgtggtgcctctggtttgctggacttgtatttctacatctg
atggttcagctctgcaaggaccgatttgaatacctttccttttctcccaccacacccatg
agtagccacgggagagttctgtccctgctggtggcaatgctgctttcttgctgtggatta
gcggtcgtctgttgtgtcacaggctacacccatggggtgcacacgctggctttcatggca
gcggagtctcttcttgtgacagtgaggactgctcatgtgattttacgatacgtaattcac
ctctgggacctcaaccacgaagggacgtgggaaggaaaaggaacctatgtctattacaca
gattttgtcatggagctcactctcttgtccctggacctcatgcaccatattcacatgttg
ttgtttggcaacatctggctgtccatggccagcctggtcatcttcatgcagctgcgctac
ctgttccatgaagtgcagcgtcgcatccgccggcacaagaactacttgcgcgtggtgggc
aacatggaggcccggtttgcggttgcaacgccagaggagctggctgtcaacaacgacgac
tgtgccatctgctgggactccatgcaggccgcgaggaaactgccctgcggacatcttttc
cacaactcctgccttcgttcctggctagaacaagacacctcctgcccaacatgcagaatg
tctcttaatattgccgacaataaccgggtccgggaggaccagcaaggggacaacttggat
gagaatttggtgccggtagcagccgctgaaggccgacctcgcctaaaccaacacaatcac
ttcttccactttgatgggtcccggatcgccagctggctgccgagtttttcagtcgaagtg
atgcataccaccaacattctcggcattgcgcaggccagcaactcgcagctgaacgccatg
gctcatcagattcaagaaatgtttccccaggttccataccacctcgtgctgcaggacctc
cagctgacacgctcggtagaaataacaacagacaacattttagaaggacggattcaagta
ccttttcccacacagcgctcagatggcatcaggcccgcactgaacagtcccatggaaagg
ccaaacggagaccaggaggagggagaagcttccgtgcagaccgagcgtgtgccgctagac
ctcagtcctcggctggaggaggccttggatctcagcgaggcggaggtggaggccggtgag
ggggaggacttcgaggcccggggcagccgcttctccaagtctgcggacgagaggcagcgc
atgctggtgcagcggaaggacgacctcctgcagcaggctcgcaagcgtttcctgaacaga
agttctgaagtcgacgccgcctccgagagctgccccttgtcggaaggcacgacctctgac
cccgtgaccctgcgtcgcaggatgctggccgcggccgccgaacggaggctccagaagcag
cagctctcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

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