KEGG   Ursus arctos horribilis (North American brown bear): 113252426
Entry
113252426         CDS       T05909                                 
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
uah  Ursus arctos horribilis (North American brown bear)
Pathway
uah03250  Viral life cycle - HIV-1
uah04144  Endocytosis
uah04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113252426 (VPS4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113252426 (VPS4A)
  09143 Cell growth and death
   04217 Necroptosis
    113252426 (VPS4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:uah04131]
    113252426 (VPS4A)
   03400 DNA repair and recombination proteins [BR:uah03400]
    113252426 (VPS4A)
Membrane trafficking [BR:uah04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    113252426 (VPS4A)
DNA repair and recombination proteins [BR:uah03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    113252426 (VPS4A)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_14 AAA_16 AAA_22 AAA_25 AAA_5 RuvB_N IstB_IS21 AAA_17 AAA_18 DUF815 AAA_2 AAA_33 RNA_helicase nSTAND3 AAA_24 PhoH ResIII AAA_28 Mg_chelatase AAA_7 NACHT Parvo_NS1 bpMoxR YhdB DUF5906 AAA_30 TPR_2
Other DBs
NCBI-GeneID: 113252426
NCBI-ProteinID: XP_026350896
Position
Unknown
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPGVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccattgatctggtgacgaaagccacagaagaggat
aaagccaagaattacgaggaggcactccggctctaccagcatgccgtggagtatttccta
cacgctatcaaatatgaggcacacagcgacaaggccaaggagagcattcgagcgaagtgc
atgcagtacctagaccgggcagagaagctgaaggattatttacgaaacaaagagaagcat
ggcaagaagccagtcaaagaaaatcagagtgagagcaagggcagtgatagtgacagtgaa
ggggataatccagagaaaaagaaattgcaagaacaactgatgggtgctgttgtgatggag
aagcccaacattcggtggaatgatgtggctggcctggagggggccaaggaggccctcaaa
gaagctgtcattttgccaattaaatttccacacttgttcacaggcaagcgtacaccttgg
cgagggatactgctctttggaccccctggcacggggaaatcctacctggccaaagcggtg
gccacagaggccaacaactccaccttcttctctgtgtcctcctcagacttgatgtctaag
tggttgggggagagtgagaagctagtcaagaacctgtttgagctggccaggcagcataag
ccctccatcatcttcatcgatgaggtggattccctctgcgggtcccgcaatgaaaatgag
agcgaggccgcccgaaggatcaaaacggagttcttggtgcagatgcagggggtagggaat
aacaacgatgggactctggttcttggtgccacaaacatcccctgggtgttggattcagcc
attagaaggaggtttgaaaagaggatttacatcccgctgcctgaggaggctgcccgtgcc
cagatgttccggttgcatctggggagcactccccacaaccttacggatgccaacatccat
gagctggcccggaagacggaaggctactcaggtgccgacatcagcatcattgtgcgggac
tccctcatgcagcctgtcagaaaagttcagtcagcaacacacttcaaaaaggtctgtggc
ccttcccgcaccaaccctggcgttatgatagatgacctcctgaccccgtgctcaccaggg
gacccaggggccatggagatgacttggatggatgtccctggtgacaaactcttagagcct
gtggtttgcatgtcggacatgctccggtctctggccaccactcggcccaccgtgaatgca
gatgacctcctgaaagtgaagaaattctcagaggactttggacaggagagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (32)   
   Pfam (32)   
All databases (46)   

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