KEGG   Ursus arctos horribilis (North American brown bear): 113259622
Entry
113259622         CDS       T05909                                 
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
uah  Ursus arctos horribilis (North American brown bear)
Pathway
uah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:uah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113259622 (PNLDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uah03019]
    113259622 (PNLDC1)
Enzymes [BR:uah01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     113259622 (PNLDC1)
Messenger RNA biogenesis [BR:uah03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     113259622 (PNLDC1)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 113259622
NCBI-ProteinID: XP_026360950
Position
Unknown
AA seq 531 aa
MDVGADEFEQSLPLLQELVLGADFVGLDIEFTGLRSNLSRRQQISLFDLPSEWYLKTRRS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFTFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILTGNWRVRSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGIAGFQAFEVQLVLRQALPDIWTVLRDQGILVKKVSKQHRWYLENTSCDRASCWKE
KILLSARGFSLFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKLNIHNLFPV
LIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPEVIHASKCEKYVETKYPH
EAAYDAFLCGSVLLKVAHLLLWRVHGAGPMPEPSFPLYLDLLAPYVNQVNLIRAGVPKIN
FSGPDCPSIRPPILLLHVRRWPEVSEQQVYWEFQNLCKFDVRRLSRSQFLLLTNKFKDAR
SILKEYRGHPTLQVSLYRYWRHSPNINCLLQVCGVVTTWALLALLLGRPGL
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggacgtgggcgccgacgagttcgagcagagcctccctctgctgcaggagctggtcctg
ggcgccgacttcgtgggtttggacatagagttcacgggccttcgctctaacctgtcccgc
cgccagcagatcagtctttttgacttgccctcggagtggtatctaaagacccgccgtagt
gttcagcagttcaccatctgtcagattggattgtctgtgttctctagtattgaaggggag
tcaaacaagtatgtagcccattcgtgtaacttctttctcttcccgacgacatttgggatc
ttggattcagaattcactttccaggcttctagtgttcagtttttgaatcagtatggcttc
gactacaacaagtttctcaaaaatgggatcccatatatgaatgaagagcaggagaagaaa
attaaacacaacatcctgactggcaactggagagttcgcagttctctggacaaagaccag
atcaaggtggtgatcgatgaggtgacacggtggctggacttggcggaggagggcgactgg
atgactctccctggtattgctggcttccaggcctttgaggtccagctggtactgaggcag
gccctccccgacatctggacagtcctgagagaccaggggatattagtgaaaaaagtgagt
aaacaacatcgctggtatcttgagaacacctcctgtgatcgagcgagctgttggaaggag
aaaattcttctctctgccaggggtttttcattgtttttccagatgctggtgaaagcccag
aagcccctggtgggccacaacatgatgatggatctgctgcaccttcatgagaagttcttc
cggccgctcccagaaagctatgatcaatttaagctgaatatccacaacctatttcctgtt
ctcattgacaccaagaacgtgaccaaggatatctggaaggaactgaatttcccaagggtt
tcaaatctttcagaagtttatgaagtcctaaacagcgacttgaatcctactaaaaattct
gggccagaggtcattcacgcaagcaagtgtgagaaatacgttgagaccaagtacccccac
gaggctgcgtacgatgccttcctctgtggatcagttcttctgaaagtggcacacttgctc
ctgtggagagtacatggtgccggccccatgcctgagccctccttccctctgtacctcgac
ttgctggctccctatgtgaaccaggtgaatcttatccgagccggggtccctaagattaat
ttttcgggtccagattgccccagtatccgacctcccatcctcctccttcatgtccggagg
tggcctgaggtcagcgagcagcaggtctattgggagtttcagaatctctgcaagttcgat
gtgcggcgactctcgaggagccagttcctgctcttgaccaataagtttaaggatgctcgg
agcatcctgaaggagtacaggggccaccccaccctgcaggtctccctgtaccggtactgg
aggcactccccgaacatcaactgcctgttacaggtctgtggcgtggtcaccacctgggcc
ctcctggcacttctcctcggaagacctggcctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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