KEGG   Ursus arctos horribilis (North American brown bear): 113267908
Entry
113267908         CDS       T05909                                 
Symbol
PTCD1
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial isoform X1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
uah  Ursus arctos horribilis (North American brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:uah03016]
    113267908 (PTCD1)
   03029 Mitochondrial biogenesis [BR:uah03029]
    113267908 (PTCD1)
Transfer RNA biogenesis [BR:uah03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    113267908 (PTCD1)
Mitochondrial biogenesis [BR:uah03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    113267908 (PTCD1)
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1
Other DBs
NCBI-GeneID: 113267908
NCBI-ProteinID: XP_026372016
Position
Unknown
AA seq 718 aa
MFLTCARPWRRKSEMDLARLARLFSGLRPMGLSTLQHFDPLGAKWAGGREGPAWLRAAGL
TRACSSSSSQPPLGQGNQENTSSLSSDLSQPSPTAAQEEEEESFGTLSNKYSSRRMFRKS
TAQLYNLRLREQSAEDEERELEPKSWQGRRNTPYWYFFQCKRLIKEGKLAEALDLFERQM
LKEERLQPLECNYTVLIGGCGRAGYLKKAFRLYNDMKKRDLEPSDATYTALFNVCAESPW
KDSALQSALKLRQQLQARSFQLNLKTYHALLKMAAVCADLRLCLDVFKEIVQKGHAVTEE
TFSYLLMGCIQDKETGFRYALQVWRQMLSLGLRPSRHGYNLLLGAARDCGLGDPEVASAL
LLRPVEEMVMRQPLARGFRARRRAQAQVGDGMSVRLHVEALERQLFLEPSQVLEGLPEPC
EARAPSKAQPEVETKMEPDHMVALTSLAPEPSPWGLEVNFLTLGAVPPAVVSFGTVTTPA
DRLALMGGLEGFLGKMAEHGLRPNIKTLTLLAEVVEPGSPAESSLLTVLDTYQVEADVTF
FNTLMRKKSKLGDLEGAKALLPILAERGIIPNLRTFCNLAIGCHRPRDGLQLLADMKKSQ
MTPNTHIYSTLINAALKKLDYTYLIDILKDMRQNRVPVNEVVIRQLEFAAQYPPSFDRYK
EKNTYLEKIDGFRAYYKQWLKVMPAEETPHPWQKFRTKHQGNQDPITEEDVDGGLVGR
NT seq 2157 nt   +upstreamnt  +downstreamnt
atgtttttgacctgtgccaggccctggaggagaaagtcagagatggaccttgcgagattg
gcccggctcttctctggactccgccccatgggactgtccaccctccagcactttgaccct
cttggagccaaatgggcaggaggcagggaggggcctgcatggctacgggctgcggggctg
actcgagcctgcagcagctcctcgtcacagccgcctctgggccaggggaaccaggagaac
acgagcagcctcagctctgacctgagccagcctagccccacggccgctcaggaggaagag
gaagagagctttgggaccctctccaacaagtactcctcgaggagaatgttccgaaaatcg
acagcccagttgtataatctacggctcagggaacagagtgctgaagacgaggaaagggag
ctggagccaaagtcatggcagggccggagaaacacgccttactggtacttctttcagtgc
aaacgcctgatcaaagaagggaagctggccgaggccctggacctgtttgagcggcagatg
ctgaaggaggagcgactccagcccctcgagtgcaactacacggttctgatcgggggctgc
gggcgagccggatacctgaagaaggccttccggctctacaatgatatgaaaaagcgggac
ctggagccctcagatgccacgtatacggccctgttcaacgtctgcgctgagtccccctgg
aaggactctgctctgcagagcgccctgaagctccggcagcagctccaggccagaagcttc
cagctcaacttgaagacgtaccatgcgctgctgaagatggctgccgtgtgcgcagacctc
aggctgtgcctcgacgtgttcaaggaaatcgtccagaaagggcatgcagtcacggaggag
accttcagttacctgctcatgggctgcatccaggacaaggagacaggtttccgatatgcc
ctgcaggtgtggaggcagatgctgagcctggggctccggccgagtcggcatggctacaac
ctactcctaggggcagctcgagactgcggcttgggggacccagaagtggcctcagcactg
ctcctgaggcctgtggaggagatggtcatgcgccagcccctggcacgtgggtttcgggca
aggaggagagcccaggcccaggtgggtgatggcatgtcagtcaggctgcatgtggaggcc
ctggagaggcagctatttctggaaccttctcaggtgcttgagggtcttccggagccttgt
gaagccagagcccccagcaaggcccagcctgaggtggaaactaagatggagcctgaccac
atggtggccctcacttccttggccccagaaccttctccctgggggctggaggtcaacttc
ctgactttgggagccgtccccccagctgtggtctcgtttgggactgtgaccaccccagct
gacaggctggccttgatggggggcctggagggcttcttgggcaagatggcagagcatggg
ctccggcccaacatcaaaaccctcacgctgttggctgaggtggtggagcccgggagtccc
gcggagtcctcgctgctgactgtcctggacacgtaccaggtggaagctgacgtgacgttc
ttcaacacactgatgaggaagaagagcaagcttggcgatctggagggggcgaaggcgctg
ctgcccattctggcagagaggggcatcatccccaacctgcggaccttctgcaacctggcc
atcgggtgccacaggcccagggacggtctgcagctgcttgcagacatgaagaaatcccag
atgacccccaacacccacatctacagcaccctcatcaacgcagccctcaagaagctggac
tacacctatctcattgacatcctgaaggacatgaggcagaacagagtcccggtgaatgag
gtggtcatccgccagctggagtttgcagcccagtacccgccctcctttgatcggtacaaa
gagaaaaacacctacttggagaagattgatggcttccgagcttattataagcagtggctg
aaggtgatgccagcagaagaaaccccccacccatggcagaagttccggaccaagcaccag
gggaaccaagaccccatcacggaggaggatgtggatggaggcctcgtaggcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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