KEGG   Ustilago maydis: UMAG_03550
Entry
UMAG_03550        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
uma  Ustilago maydis
Pathway
uma03020  RNA polymerase
uma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UMAG_03550
  09124 Replication and repair
   03420 Nucleotide excision repair
    UMAG_03550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uma03021]
    UMAG_03550
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_03550
Transcription machinery [BR:uma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     UMAG_03550
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      UMAG_03550
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 23563973
NCBI-ProteinID: XP_011389986
UniProt: A0A0D1CPC3
Position
9:487946..489043
AA seq 329 aa
MNGRYDATSSRPKITVRQLDRDHANFILENVDLSFANSLRRIMIADIPTVAIDMVEIRNN
TTVLPDEMLAHRLGMVPLLSMDCAKALVDHRDCACEDGCDRCSVELTLRARCTTRGNLEV
TSRDLIRSDTIENATIYDDDAMAEPAAPKHPDFGRPVGHDGSIAPIMLVKMSKGQELDIR
CIARKGFAKEHAKWSPCSAVGFEYDPHNALRHTTYWYEFDAKQEWPEGPNAECEEPPQEG
APFDYNKKASKFYFDVEASGSMHPAEIVETGLGLLEYRVAQIVQELSMLDDQPGAGGVGP
MGNGMIDYGGPGVAMAMNGYQSQPVNPYD
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaatggaaggtacgacgcgacgtcgtcgcggcccaaaatcacggtgcgacaactcgac
cgagaccacgcgaatttcatactcgagaatgtcgatctctcgtttgccaattcgctgcga
aggatcatgattgccgacattccaacggtagcgatcgatatggtggagatcaggaacaat
accactgtgctgccagatgagatgttggcgcatcgactcggtatggttccgttgcttagc
atggactgcgccaaggcgctggtggatcacagggattgcgcatgtgaagacggttgcgat
cgatgctcagtcgaactcacactgcgcgcgcgctgcacgacacgcggtaatctcgaggtg
acttctcgagacttgatacgttcggacacgatcgaaaacgcaacgatttacgatgacgat
gcaatggccgaacccgctgcgcccaaacatccggatttcggacgtcccgtcggacacgat
ggttccatcgctccgatcatgctggtcaagatgtccaaggggcaagaactcgatattcgg
tgcatcgcacgaaagggattcgccaaagagcatgcaaaatggtcgccctgttcagcggtt
ggtttcgagtacgatccgcacaacgcgctccgccacaccacctactggtacgaattcgat
gctaagcaagaatggcccgaaggacccaacgccgaatgcgaggaaccgccgcaggaaggc
gcgccgttcgactacaacaagaaagccagcaagttctactttgatgtcgaagccagcgga
agcatgcacccagccgagatcgtagagacagggctgggattgttggagtacagagtggcg
cagatcgtgcaagaacttagcatgctggacgatcaacccggtgccggcggtgtcgggccc
atgggcaacggtatgatcgactacggtgggcctggtgtcgcgatggccatgaacgggtac
cagtcgcagcctgtaaacccttacgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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