KEGG   Ustilago maydis: UMAG_04713
Entry
UMAG_04713        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K15326  tRNA-splicing endonuclease subunit Sen54
Organism
uma  Ustilago maydis
Brite
KEGG Orthology (KO) [BR:uma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:uma03016]
    UMAG_04713
Transfer RNA biogenesis [BR:uma03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    UMAG_04713
SSDB
Motif
Pfam: tRNA_int_end_N2 tRNA_int_endo_N
Other DBs
NCBI-GeneID: 23564805
NCBI-ProteinID: XP_011391601
UniProt: A0A0D1BXJ9
Position
17:complement(56260..58542)
AA seq 760 aa
MVIAPTTPRRRTTASSSFSPLSPTLSPTSASRTPATPSFDVQQDMEDPTATPSAYIRSNT
ASSSKPSPVSEPHVADDSDAEDEAPDYLRLLSTLHPKSKSASNASGIVIPKRGEKDFEPT
GFGGQSKLLERSREAMFTAVSGERRVAYRSLVRATWDARTRRARLLDIQGKIFETVGVIQ
REQVVDKATGKLVTKAWNELLPEEALFLTERGSLQIYHPAEAQPQPQPQPNEEEPALVPM
SVQQAFAALMQPLSEPDSTIQQDEPLTREAYLIYAHLKRLGYVVQRASIVDAIRAAPISA
SALAKKNTTNQTQAAQQSSAKANQPVKPKSIIADPQRPIKLTTIFDILLYAPRRIMQLAA
DGVSALVDWWQWIWRNTMVRMGTWIAALAWRARGTSGRANATATATAPGLGLGLGLGLHN
QHQDGRRFLGEKGACIEWNTYDAVFSSLQIVPSGHDFWLPCDSTGDVQTETCSATSTIRL
VPGSHSRSSRNELKPFYYAWRPATLYRKSHPPPAEFRIVILNARTTPVPSVWAFETMFAH
IPVPGSDQELVGGACSSTTSATEQGGQGVERTMSEHEIRERLEYEKQLKASNQAKNRAAY
GKFSQGKQKFLREKAAARQQAAERRKELLKSSSANEWAKRMRHTSVYTMLVRIALLDFTP
VKAVARLFRHSPGCWSPPARANRMHAGAKWKSRNTPREGGNGRGSTGNPFPPLKAGRRSV
VVAVVDGSVTTLLRFGEAEFAHWSLYGLPHESQTQSHHTP
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggtcattgcacccaccacgccacgtcggcgcacaacggcatcatcatctttctcgcca
ctgtcaccaactctgtcacccacttctgccagtcgcacacccgctacaccatcgttcgat
gtacagcaagacatggaggatcccaccgcaacaccgagcgcctacatccgatccaacact
gccagctcctcgaaacctagccctgtctctgaaccgcacgtcgccgatgactcagacgcc
gaagatgaagcgcccgactatctccgcctgctctccaccctccatcctaaatccaaatct
gcttccaacgcatccggcatcgtcatccccaagcgaggcgagaaagatttcgaacccacc
ggtttcggtggtcaatccaaactgctcgagcgaagcagagaagccatgttcacagccgtc
tcgggagagcgcagagtggcatatcgctcgctcgtgcgagccacgtgggatgctagaacg
aggagggcgagattgttggacatacagggtaaaattttcgaaaccgtgggggtgatccag
agagaacaggtggtcgacaaagctacaggcaagttggtcaccaaagcatggaacgagcta
ttgcctgaagaagctttgtttctcaccgaaagaggcagtctgcagatctatcacccagcc
gaagcgcagccgcagccgcagccgcagccgaacgaggaggagccggcgctggtgcccatg
tcggtacaacaagcgtttgccgcattgatgcagcctctgagcgagccagattcgacgata
cagcaagacgagccactgacgagggaagcctatcttatctatgcccacctcaagcggctc
ggatacgtggtgcaacgcgcgagcatcgtagacgccattcgtgccgccccgatctcggct
tctgcgctcgccaagaagaacacaaccaaccaaactcaagcggcgcagcaatcttcggca
aaagccaatcagcctgtcaagccaaagagtatcattgcggatccgcagcgtccgatcaag
ctcaccaccatcttcgacattttgctgtacgcaccacgacgtataatgcagcttgcagcc
gacggcgtgagcgcgttggtggattggtggcagtggatttggcgcaacaccatggtcaga
atgggtacgtggatcgccgcgctggcatggcgtgcccgtggaacgagtggaagagcgaat
gcgacggcgacggcgacggcgcctggtcttggtctcggcctcggtctgggattgcacaac
cagcaccaggatggacgacgcttcctgggcgaaaagggcgcgtgtatcgagtggaacact
tacgatgccgtgtttagctcgttgcagatcgtaccctctggacatgacttttggctccct
tgcgactcgacaggtgatgttcaaaccgaaacttgctctgccacctcgaccatccgactc
gtgcctgggtcgcattcaagatcatccaggaatgagctgaaaccattctactacgcctgg
cgaccggcgacactgtatcgcaaatcgcatcctccaccggccgagttccggatcgtgatc
ctgaatgcacgcacgacgcctgtaccgtcggtgtgggcgtttgaaacaatgtttgcgcac
atcccggttcccggatcggaccaggagctggtcggtggtgcttgctcaagcactacaagt
gccaccgaacaaggcgggcaaggcgtcgagcgaacgatgagcgagcacgaaattcgagag
aggctcgagtacgaaaagcaactcaaggcatccaaccaagccaaaaaccgagcggcgtac
ggcaaattcagccaaggcaagcaaaagtttctgcgcgaaaaagcagcagccagacagcaa
gctgctgaacgaagaaaggagcttttgaaaagctcgagtgcgaacgaatgggcaaaacgg
atgcgccacacaagcgtatatacgatgctggttcgaatcgcactgctcgatttcacgccg
gtgaaagcggtggcgaggctcttccggcattcgcccggctgctggtcgccccccgcacgt
gccaacaggatgcacgcaggtgccaagtggaaatctcgcaacacacctcgtgagggaggc
aacggaagaggcagcactggcaatcccttcccgccgctcaaggcgggcaggaggagcgtg
gtcgtcgcagttgtcgacggcagtgtcacaacgttgctccgcttcggcgaggctgaattt
gctcattggtcgctctacggtttgccgcacgagtcgcagacgcagagccatcacacgccg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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