KEGG   Ursus maritimus (polar bear): 103665000
Entry
103665000         CDS       T03271                                 
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103665000 (DHX16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:umr03041]
    103665000 (DHX16)
Enzymes [BR:umr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103665000 (DHX16)
Spliceosome [BR:umr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    103665000 (DHX16)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    103665000 (DHX16)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_30 AAA_19 Flavi_DEAD nSTAND3 SecA_DEAD SRP54
Other DBs
NCBI-GeneID: 103665000
NCBI-ProteinID: XP_008691131
UniProt: A0A384C8C1
Position
Unknown
AA seq 1111 aa
MTDGFRSPPSGKTVLGCRKASPKVLRQVLCGTQTRARPPGLQASDGPSHQRGYSRRFRAR
NGAAWVTMATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRSASAEEFVQRLRDTDTL
DLSGPARVFALRLWNKVPRKALVEKPARVAEREARALLEKNRSYKLLEDSEESSEETVGR
AGSSLQKKRKKRKHLRKKCQEEEEEEEEEISEKGKRKTGGSKQQTEKPESEDEWERSERE
RLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKS
RREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQE
KLEATNRYHMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQE
PKYQLVLEEEETIEFVRATQLQGDEEPSGPPPPTQAQQKESIQAVRRSLPVFPFREELLA
AIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMG
VKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTD
ILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEAD
YLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYAN
LPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLT
VTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL
GIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILA
SEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE
SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYH
TARLTRSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLE
VAPHYYKAKELEDPHSKKMPKKIGKTREELG
NT seq 3336 nt   +upstreamnt  +downstreamnt
atgaccgacggtttccggtctccgccgtccgggaagacggttttgggctgtaggaaagcg
agccctaaagtcctaaggcaggtcctttgcggaactcaaactcgagccaggcctccaggc
ctccaggcctccgacgggcccagccaccagcgtggctactcgagacggttcagggccaga
aacggggcagcgtgggtcaccatggcgacgccggctggactggagcgctgggtgcaggac
gagctgcattcggtgctggggctgagcgagcggcacgtggcccagttcctgattggtacc
gcgcagcgcagcgcctcggccgaggagtttgtgcagcgcctgcgagacaccgataccctg
gacctcagcgggccggcacgggtcttcgccctgaggctctggaacaaggtaccacggaag
gcattggtagaaaagccagctcgggtggccgagcgagaggcccgagccctgctggagaag
aaccgatcctataagttgctggaagacagtgaggagagcagcgaggagactgtgggcaga
gctgggagcagtctccagaagaagcgtaaaaaacggaaacacctcaggaagaaatgtcag
gaggaggaagaagaagaggaggaagagatttctgagaaagggaagagaaagacagggggg
agtaaacagcagactgagaagccagagtcggaggatgagtgggagcggtccgagcgagag
cgccttcaggacctggaagaacgtgatgccttcgctgagcgggttcggcagcgggacaag
gatcgaactcgcaatgtcctggagcggtcagacaagaaggcttatgaagaggctcagaag
cgcctcaagatggctgaggaagaccggaaagccatggtccccgagctgcggaagaaatcc
cgccgagagtacttggctaagcgggaacgagagaagcttgaggacctggaggctgagctg
gctgatgaggagttcctttttggggatgtggagctgagccgacatgaacggcgggagctc
aaatataagcggcgagttcgggatctggcccgagagtaccgggcggctggggagcaggag
aagctggaggccaccaatcgttaccacatgcccgaggagacccgaggccagccggcacga
gctgtagatctggtggaggaggagtccggcgcccctggggaggagcagcggcgctgggag
gaggcccggctgggggcagcgtccctgaagtttggggcccgagatgctgcctcccaggag
cccaagtaccagctggtgctggaggaagaggagaccattgagtttgtccgggccactcag
ctccagggcgatgaggagccgtcaggtccaccgcctccaacccaggcccagcagaaggag
tccatccaggctgtccgccgcagcctcccggtgttccccttccgcgaggagctcctggct
gctattgctgaccatcaggtcctcatcatcgagggtgagacgggctccgggaagaccacc
cagatcccgcagtatctctttgaggagggttatacaaagaaaggaatgaagattgcctgc
acccagccccggagagtggcagccatgagtgtggctgcccgggtggcccgggagatgggt
gtgaagcttggaaatgaggttggctacagcatccgctttgaggactgcacgtcagagcga
actgtcctccgctacatgacagacgggatgctcctccgggagttcctctctgaacctgac
cttgcaagttacagtgtggtgatggtagatgaggcgcatgaacggaccctacacacagac
attctttttgggttaatcaaagatgttgctcgcttccggcctgagctgaaggtcttggtg
gcttcagccacactggacactgcccgcttttccaccttctttgatgacgcccctgtcttc
cgaatccctggacgcaggtttccagttgacatcttctataccaaggctccggaggctgac
tacctggaagcttgtgtagtgtctgtgctgcagatccatgtgacccagccccctggggat
atcctggtgttcctgacaggacaggaggagattgaggccgcctgtgagatgctccaggat
cgctgccgccgcctgggctccaaaatccgggagctcttggtgttacccatttatgccaac
ctgccttctgacatgcaggctcgtatcttccagcccacgccccctggggcacgaaaggtg
gttgtggcaacaaacatcgctgagacatcgctcaccatcgaaggcatcatttatgtgctg
gatccagggttctgtaagcagaagagctacaaccctcgcacgggcatggaatccctcact
gtcacaccctgcagcaaggcctcagccaatcagcgggccggtcgggcgggtcgggtggct
gccgggaagtgcttccgcctgtatactgcctgggcctatcagcacgagctggaggaaacc
actgtgccggagatccagaggaccagcttgggcaatgttgtgttgctgctcaagagctta
gggatccatgacctaatgcacttcgatttcctggaccctccaccatatgagaccctactg
ctggctttggagcaactgtatgccctgggagccctcaaccaccttggggagctcaccacg
tctggtcgaaagatggcagagctaccagtggaccccatgctgtctaaaatgatcctggcc
tctgagaaatatagctgttcagaagagatcctgacggtggctgccatgctgtctgtcaac
aactccatcttctaccgacccaaggacaaggttgtccatgctgacaatgcccgtgtcaac
tttttcctccctggtggagaccacctggttctgctgaacgtttatacacagtgggctgag
agtggttactcttcccagtggtgctatgagaacttcgtacagttcagatcaatgcgccga
gcccgggacgtgcgggaacagctggaggggctcttggaacgcgtggaagttggtctcagc
tcttgccagggggactacatccgggtacgcaaggccatcacagctggttatttctaccac
acggcccggttgactcgtagcggctatcgcacagtcaaacagcagcagacagtgttcatt
caccccaactcctcactctttgaggaacagccacgctggctgctctaccatgaacttgtc
ttgaccaccaaggagttcatgagacaggtattggagattgagagcagttggcttctggag
gtggctccccactattataaggccaaggagctagaagatccccattctaagaaaatgcca
aaaaaaataggcaagactcgagaagagctagggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (28)   

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