ID   A0A015JCL5_RHIIW        Unreviewed;       551 AA.
AC   A0A015JCL5;
DT   11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT   11-JUN-2014, sequence version 1.
DT   03-MAY-2023, entry version 27.
DE   RecName: Full=Pre-mRNA-processing protein 45 {ECO:0000256|ARBA:ARBA00022160, ECO:0000256|RuleBase:RU367140};
GN   ORFNames=RirG_251350 {ECO:0000313|EMBL:EXX52634.1};
OS   Rhizophagus irregularis (strain DAOM 197198w) (Glomus intraradices).
OC   Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina;
OC   Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.
OX   NCBI_TaxID=1432141 {ECO:0000313|EMBL:EXX52634.1, ECO:0000313|Proteomes:UP000022910};
RN   [1] {ECO:0000313|EMBL:EXX52634.1, ECO:0000313|Proteomes:UP000022910}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DAOM197198w {ECO:0000313|Proteomes:UP000022910};
RA   Lin K., Geurts R., Zhang Z., Limpens E., Saunders D.G., Mu D., Pang E.,
RA   Cao H., Cha H., Lin T., Zhou Q., Shang Y., Li Y., Ivanov S., Sharma T.,
RA   Velzen R.V., Ruijter N.D., Aanen D.K., Win J., Kamoun S., Bisseling T.,
RA   Huang S.;
RT   "Single nucleus genome sequencing reveals high similarity among nuclei of
RT   an endomycorrhizal fungus.";
RL   Submitted (FEB-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Involved in pre-mRNA splicing.
CC       {ECO:0000256|RuleBase:RU367140}.
CC   -!- SUBUNIT: Associated with the spliceosome.
CC       {ECO:0000256|RuleBase:RU367140}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367140}.
CC   -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197,
CC       ECO:0000256|RuleBase:RU367140}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EXX52634.1}.
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DR   EMBL; JEMT01029260; EXX52634.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A015JCL5; -.
DR   STRING; 1432141.A0A015JCL5; -.
DR   OMA; YGQRRGW; -.
DR   Proteomes; UP000022910; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   InterPro; IPR017862; SKI-int_prot_SKIP.
DR   InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR   PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR   PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF02731; SKIP_SNW; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|RuleBase:RU367140};
KW   mRNA splicing {ECO:0000256|RuleBase:RU367140};
KW   Nucleus {ECO:0000256|RuleBase:RU367140};
KW   Reference proteome {ECO:0000313|Proteomes:UP000022910};
KW   Spliceosome {ECO:0000256|RuleBase:RU367140}.
FT   DOMAIN          178..337
FT                   /note="SKI-interacting protein SKIP SNW"
FT                   /evidence="ECO:0000259|Pfam:PF02731"
FT   REGION          1..63
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          208..236
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          313..382
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          497..551
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..21
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        313..334
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        359..382
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        505..520
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        527..551
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   551 AA;  62276 MW;  A856F0F75B081ABA CRC64;
     MTTLSSVLPK PRQQLLSSEQ QNKYERKYDE LTSVKPRKQP PPYGQRSGWK PKTQEDFGNG
     GAFPEIHVAQ YPLDMGRTTT TKSVESLALQ VDAEGNIQYD AIAKHGHTES RVIHSQFKDL
     VPLNQRADIE KVTLERPGED EVKETTEKTR EALEKIVQGK IKAAQPKNVK VNKPLEPTYI
     RYTPGQQGET YNSGATQRII RMVEMPVDPM EPPKFKHKKI PRGPPSPPAP VLHSPPRKVT
     AKEQQEWIIP PCISNWKNAK GYTIPLDKRL AADGRGLQEV TINDNFSKLS EALFAADRHA
     REEVKQRALM RDKLAQKEKE EKEKRLRMLA QKAREERAGI SSASGGATGA VAESESESES
     DEEKVREREE LRRDRRKERE REYRLSRMGA EQRAKYLARE QNRDISEKIA LGLAKPTLSK
     ESMFDARLFN QSEGLDSGFK DDEAYDLYDK PLFAGASSSS IYRPKKEYDS DLYGGGNAES
     VNKMLNVDRF GITKGFQGAD TAHSRDGPVE FEKEEADPFG FNQFLDDAKK GSKRGLDTSK
     SESSKSKRGK Y
//