ID A0A017HK30_9RHOB Unreviewed; 771 AA.
AC A0A017HK30;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Transcription accessory protein (S1 RNA-binding protein domain protein) {ECO:0000313|EMBL:EYD74119.1};
GN ORFNames=Rumeso_04318 {ECO:0000313|EMBL:EYD74119.1};
OS Rubellimicrobium mesophilum DSM 19309.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Rubellimicrobium.
OX NCBI_TaxID=442562 {ECO:0000313|EMBL:EYD74119.1, ECO:0000313|Proteomes:UP000019666};
RN [1] {ECO:0000313|EMBL:EYD74119.1, ECO:0000313|Proteomes:UP000019666}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19309 {ECO:0000313|EMBL:EYD74119.1,
RC ECO:0000313|Proteomes:UP000019666};
RA Fiebig A., Goeker M., Klenk H.-P.P.;
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EYD74119.1}.
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DR EMBL; AOSK01000121; EYD74119.1; -; Genomic_DNA.
DR RefSeq; WP_037281487.1; NZ_KK088589.1.
DR AlphaFoldDB; A0A017HK30; -.
DR STRING; 442562.Rumeso_04318; -.
DR PATRIC; fig|442562.3.peg.4251; -.
DR HOGENOM; CLU_009833_0_2_5; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000019666; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00278; HhH1; 2.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000019666}.
FT DOMAIN 652..721
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 720..771
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 720..740
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 771 AA; 82524 MW; FA2505E7F4E54F40 CRC64;
MSPDIDRRIP HLIAGEIGAG IPQVAAAIAL LDGGATVPFI ARYRKEVTGG LDDTQLRTLS
ERLAYLREME ARRAAVVASI VEQGKMTDAL AQTLAKASTK AEIEDIYLPY KPKRRTKAMI
ARENGLQPLL ESILADRAAD PAELAKAYVT EAVPDAKAAL EGARDILAEG LSENAELLGR
LRGHMKQVAR LSAKVVEGKE AEGAKFSDYF AHSETWANAP SHRALAMLRG RNEGVLALDL
EVDPEAPRGE SPAERSCASA LDVRGTGPGD KWLREAASWA WRVKLRTSLS IDLMTELRER
AEEEAIRVFA RNLKDLLLAA PAGGKATMGL DPGIRTGVKV AVVDATGKVV ATDTVYPFQP
KNDLRGAQVT LAQLIARHGV KLIAIGNGTA SRETERMVAD LLGHLPGTEK PVKVIVSEAG
ASVYSASELA AKEFPDLDVS LRGAVSIARR LQDPLAELVK IEPKSIGVGQ YQHDVDQSRL
GRSLEAVVED AVNAVGVDLN TASAPLLARV SGVGPSLAGA IVAHRDQNGP FRTRRDLLKV
ARLGPKAFEQ AAGFLRVPGG DEPLDASSVH PEAYEVARKI VKACGRDIRA LMGDAAALRK
VDPRAFVDDR FGLPTVKDIL AELEKPGRDP RPSFRTASFA EGVNEIKDLK PGMLLEGTVT
NVAAFGAFVD IGVHQDGLVH VSQLADRFVK DPHEVVKAGD VVQVRVVEVD MARKRIGLTM
RKDSGEAREQ ARERGGPKDR APARGPSQAS PKGVSSDGNA FADALRGKFG R
//
