ID A0A022Q729_ERYGU Unreviewed; 377 AA.
AC A0A022Q729;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=Polyribonucleotide 5'-hydroxyl-kinase Clp1 P-loop domain-containing protein {ECO:0000259|Pfam:PF16575};
GN ORFNames=MIMGU_mgv1a008342mg {ECO:0000313|EMBL:EYU24447.1};
OS Erythranthe guttata (Yellow monkey flower) (Mimulus guttatus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Phrymaceae; Erythranthe.
OX NCBI_TaxID=4155 {ECO:0000313|EMBL:EYU24447.1, ECO:0000313|Proteomes:UP000030748};
RN [1] {ECO:0000313|EMBL:EYU24447.1, ECO:0000313|Proteomes:UP000030748}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DUN x IM62 {ECO:0000313|Proteomes:UP000030748};
RX PubMed=24225854; DOI=10.1073/pnas.1319032110;
RA Hellsten U., Wright K.M., Jenkins J., Shu S., Yuan Y., Wessler S.R.,
RA Schmutz J., Willis J.H., Rokhsar D.S.;
RT "Fine-scale variation in meiotic recombination in Mimulus inferred from
RT population shotgun sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:19478-19482(2013).
CC -!- SIMILARITY: Belongs to the Clp1 family. NOL9/GRC3 subfamily.
CC {ECO:0000256|ARBA:ARBA00011003}.
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DR EMBL; KI632125; EYU24447.1; -; Genomic_DNA.
DR RefSeq; XP_012853043.1; XM_012997589.1.
DR AlphaFoldDB; A0A022Q729; -.
DR STRING; 4155.A0A022Q729; -.
DR GeneID; 105972619; -.
DR KEGG; egt:105972619; -.
DR eggNOG; KOG2750; Eukaryota.
DR OMA; SAPCLMT; -.
DR OrthoDB; 5480745at2759; -.
DR PhylomeDB; A0A022Q729; -.
DR Proteomes; UP000030748; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0051731; F:polynucleotide 5'-hydroxyl-kinase activity; IBA:GO_Central.
DR GO; GO:0000448; P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR CDD; cd01983; SIMIBI; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR045116; Clp1/Grc3.
DR InterPro; IPR032319; CLP1_P.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR12755; CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; 1.
DR PANTHER; PTHR12755:SF3; POLYNUCLEOTIDE 5'-HYDROXYL-KINASE NOL9; 1.
DR Pfam; PF16575; CLP1_P; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Kinase {ECO:0000256|ARBA:ARBA00022777};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000030748};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 41..244
FT /note="Polyribonucleotide 5'-hydroxyl-kinase Clp1 P-loop"
FT /evidence="ECO:0000259|Pfam:PF16575"
SQ SEQUENCE 377 AA; 41681 MW; B72FCAC4ADDB40F2 CRC64;
MAPDSESDRS SPDIFIPDEW SNTADAIANC SVDSPIAFVC GPKNSGKTTF SRHLLNVLLQ
RHKKVAYLDT DVGQTEFTPP GLLSLTIVDK ITPDLTIPCL KTPERCFFFG DISSKRDPVI
YLSYISALYD HYLKEYCTDN KTKFQGTTTS LPLVINTPGW VKGIGYELLV GMLKHMSPTH
VVKIRISSES KNLPRGAFWS NEVNNDSVCV IEINAARQDH LKRSVLVQKD ARLLRDMRLM
SYFRQCLPSD MTISTLKELT RELCALHPYE VKISNVEIKH LHSQVPVSEI FGSLNATIVG
LAVSSVSEKW PQCVGLGIVR AVNGPSKGVI YVLTPVPQKV LEDVDLLLMG SIQTPTALLL
APGCVSPYMS ANVVPYI
//
