ID   A0A023DF83_9BACI        Unreviewed;       569 AA.
AC   A0A023DF83;
DT   11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT   11-JUN-2014, sequence version 1.
DT   27-MAR-2024, entry version 48.
DE   SubName: Full=Putative TyrR family transcriptional regulator {ECO:0000313|EMBL:GAJ39939.1};
GN   ORFNames=GCA01S_030_00200 {ECO:0000313|EMBL:GAJ39939.1};
OS   Parageobacillus caldoxylosilyticus NBRC 107762.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Parageobacillus.
OX   NCBI_TaxID=1220594 {ECO:0000313|EMBL:GAJ39939.1, ECO:0000313|Proteomes:UP000023561};
RN   [1] {ECO:0000313|EMBL:GAJ39939.1, ECO:0000313|Proteomes:UP000023561}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 107762 {ECO:0000313|EMBL:GAJ39939.1,
RC   ECO:0000313|Proteomes:UP000023561};
RA   Hosoyama A., Hosoyama Y., Katano-Makiyama Y., Tsuchikane K., Ohji S.,
RA   Ichikawa N., Yamazoe A., Fujita N.;
RT   "Whole genome shotgun sequence of Geobacillus caldoxylosilyticus NBRC
RT   107762.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAJ39939.1}.
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DR   EMBL; BAWO01000030; GAJ39939.1; -; Genomic_DNA.
DR   RefSeq; WP_017434254.1; NZ_BAWO01000030.1.
DR   AlphaFoldDB; A0A023DF83; -.
DR   OrthoDB; 9771372at2; -.
DR   Proteomes; UP000023561; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00130; PAS; 2.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR030828; HTH_TypR.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   NCBIfam; TIGR00229; sensory_box; 2.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF18024; HTH_50; 1.
DR   Pfam; PF00989; PAS; 2.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00091; PAS; 2.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 2.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000023561};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          6..51
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          116..167
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          183..235
FT                   /note="PAC"
FT                   /evidence="ECO:0000259|PROSITE:PS50113"
FT   DOMAIN          258..487
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   569 AA;  64668 MW;  20C803A072FE9434 CRC64;
     MMAIIASEML EHIFSSIHNG IIVIDQHNRI VFLNKAAKKL LHIEHDHWKG KDIRGFIPTT
     QLPHVVETGE STIGVKVNIA GRACLVNRTP LYCDGKRIGA IAVLQDISEM EHYHQLSKKM
     ETIIEFSTDG IYVVDGNGVT LMVNSAYEKI TGFRREELIG RHMEELVGKG YFDQSVSLLV
     LQQKQRVSIL QKIGGKKDVI VTGNPVFNDQ GEIDMIVTSV RDISKLNELK MELEKAKSFS
     QMSQHRYTFS TSDSDEQIIC RSPLMKTLIH KVEQIAAYPT TVLLTGPSGV GKEVIANMIH
     HLSPRKDQPF IKVNCAAIPE TLLESELFGY EKGAFTGAQA SGKIGLFELA DRGTIMLDEI
     GEMPLSLQVK LLRVLQEKQI QRIGSRHAKK LDIRIIAATN QNLSELIASG KFRSDLYYRL
     QVIELFIPPL AERPEDIEPL LDHYFTFYCK LYRIHKQLSP RTKAVLQQYH WPGNVRELKN
     LMESLVVSVP ARYIEPDDLP THIRSQSDTS SCLTLKEKVE QFEKRLVYEA IEKSPSLRKA
     AERLGIDHST LIKKLKRWQK TETPRPYSY
//