ID A0A024G174_9STRA Unreviewed; 981 AA.
AC A0A024G174;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN ORFNames=BN9_012930 {ECO:0000313|EMBL:CCI40509.1};
OS Albugo candida.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Albuginales; Albuginaceae; Albugo.
OX NCBI_TaxID=65357 {ECO:0000313|EMBL:CCI40509.1, ECO:0000313|Proteomes:UP000053237};
RN [1] {ECO:0000313|EMBL:CCI40509.1, ECO:0000313|Proteomes:UP000053237}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ac Nc2 {ECO:0000313|EMBL:CCI40509.1,
RC ECO:0000313|Proteomes:UP000053237};
RA Gardiner A., Kemen E., Schultz-Larsen T., MacLean D., Van Oosterhout C.,
RA Jones J.D.G.;
RT "Recombination and specialization in a pathogen metapopulation.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCI40509.1}.
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DR EMBL; CAIX01000009; CCI40509.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A024G174; -.
DR STRING; 65357.A0A024G174; -.
DR InParanoid; A0A024G174; -.
DR OrthoDB; 2786103at2759; -.
DR Proteomes; UP000053237; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR45727; NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1; 1.
DR PANTHER; PTHR45727:SF2; NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 4: Predicted;
KW Lipid transport {ECO:0000256|ARBA:ARBA00023055};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000053237};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Transport {ECO:0000256|ARBA:ARBA00023055}.
FT TRANSMEM 12..34
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 281..300
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 312..335
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 423..443
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 455..479
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 539..558
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 792..812
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 818..840
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 852..876
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 896..921
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 933..956
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 280..480
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT REGION 386..405
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 386..403
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 981 AA; 110352 MW; 3581257BB5993DA7 CRC64;
MFFSLSLYCS QFPCRVWITC FLTSLILSLG SFYVTIQNDP EKLWVPSTSA TAMQQARFNH
LFGAFFRIEQ FILYADRDNL QDDLIEREYL QLIAKIQNKI ELTRINDSRL SAKEIGLQDF
CYQPIAGKGC LVMSPFQYWL NNISILDGDP DIKLTTACQT TDQVLKERAP CMDAIGVPVM
QNVVFGGISR DTCHVNPDPC GQSTPKASAL VVTFLLENKL DNVTYTKMAE QWEEQVFLDT
ARSFQEELML SKPSNRTKIR LAYMAQRSVS DALKSETSQN VVVVVASYFI MFLYVSMTLG
PWRNPISSRF GLGLTGIMIV IMSIAVSLSI CATIFHIEVT MITLEVVPFL ILAIGVDNMF
ILTDEFDRQK RLHGYVDYEF DSRNGNTPSD FSQRTTSSHA GSRRSRSCSE DDLLLQEITC
QTMANVGPSI VVAAVSECLA YFIGTLTKIP ALETFCVVAA VAVLVDLVLQ LTWFMSAIVM
DAHRVRARRY DLLPWIKKCT PSKAKSHGEK YNKAKTSTLQ AYIQQRYTPF LMKKRTKTAV
LLLSGFMILL SLCVLPQIPL GLEQELAVPT DHYLHEYFRV QTELGAAGPP AYVTISEKIE
YTDSQIQEKL LGILDQLSSL HEYIQLPVYS WLNTFNQWRQ MRYFLHGKIA QKLCDCPSQP
LLPFAYERDH SPILSLSDLT PDADFYPLAK NFTEIPIDSQ CCQNYGICGA QYQKDIIFEI
SNNHNHSNSS KVVGITGSRF RFQVNALGNQ TMFINSYYYL QKMAKIWSRS IPIFIYSLYF
VFYEQYTYIQ GVGLQSILLA LGVVFISVFL LIDRNIRLSL LVVVGVFGIV ISQLGFIFLI
NQSTFAKTSV NAVSVVNLLA AVGLGVEFCV HLTYHFALSQ RHQATLSAHD HVANALAARG
APIISGITLT KTVGIGVLAF APSLLFRVYF FRMYLGIVLF GAFYGVVVLP VLLSVFGQRN
TILNDSSIFL LSEELDDVGE T
//
