ID A0A024GU38_9STRA Unreviewed; 645 AA.
AC A0A024GU38;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=BN9_116190 {ECO:0000313|EMBL:CCI50106.1};
OS Albugo candida.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Albuginales; Albuginaceae; Albugo.
OX NCBI_TaxID=65357 {ECO:0000313|EMBL:CCI50106.1, ECO:0000313|Proteomes:UP000053237};
RN [1] {ECO:0000313|EMBL:CCI50106.1, ECO:0000313|Proteomes:UP000053237}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ac Nc2 {ECO:0000313|EMBL:CCI50106.1,
RC ECO:0000313|Proteomes:UP000053237};
RA Gardiner A., Kemen E., Schultz-Larsen T., MacLean D., Van Oosterhout C.,
RA Jones J.D.G.;
RT "Recombination and specialization in a pathogen metapopulation.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCI50106.1}.
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DR EMBL; CAIX01000393; CCI50106.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A024GU38; -.
DR STRING; 65357.A0A024GU38; -.
DR InParanoid; A0A024GU38; -.
DR OrthoDB; 4825346at2759; -.
DR Proteomes; UP000053237; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12421; RRM1_PTBP1_hnRNPL_like; 1.
DR CDD; cd12423; RRM3_PTBP1_like; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000053237};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 32..106
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 176..262
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 389..464
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 506..581
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 114..168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 323..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 584..645
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 114..134
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 135..161
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..346
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 584..601
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 603..645
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 645 AA; 72775 MW; 9931ABFE4F4B78C9 CRC64;
MTEPATGKRG AKELENNRPM SKRARSSNPE SRVVFVHGLP QDCLESELLA LCCPFAVVEK
SLLITQKSQA FVQLPDVSSA TNLINFYQTR DATIRGARIF FEYSNRSEIT TRAGFQDEHS
IDQNHSHRSN RPNTRQEHSS GYENMTKNQH PSRSGDSGNG STGRRGGYAG APNTILMVTV
TKIDYDVTVD VLQQVFQKFG NVQKVVTFWK NEEFKALVQM ESIDQAQAAQ QALDGRDIYT
GCNTLGIVFS RHPELRVRFN NDRSWDYMNP GLPPGPSVAD GNGPDINYDE GPMPGMLGDV
PNSQGRGGSG VYGPRNDFTD EHEGYMEGPR FDSRGPGPDR FDDDSFGHMP PGYSLPPHST
GRSLRPDKRR SPVLICSNMD QKLVVCHRTL VLLLRLMRFH SQTPDRLFTF FGCFGDVVRV
KIMFRKQDTA LIQFVDDFHA TSALDHLDGV YLFNKKLRVD YSKHQNVSMP RGEVDLFELE
NTRDFSQSPL HRYRRRSPQE AVSPCPLLHI SGIPMELQRN QNALVELFQP YGFVKNFHFI
KQNNKMAIIE MATMDEAVMA LLCLDNLSYP DSHMRVSFSK TYFQPGMGNP PTSGNASRSH
NRNGRSRSRD RDRDMSRAPF SRDRGPGRGG RGDSDGGFRR YGGRY
//
