ID A0A024GUQ7_9STRA Unreviewed; 626 AA.
AC A0A024GUQ7;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=BN9_116210 {ECO:0000313|EMBL:CCI50108.1};
OS Albugo candida.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Albuginales; Albuginaceae; Albugo.
OX NCBI_TaxID=65357 {ECO:0000313|EMBL:CCI50108.1, ECO:0000313|Proteomes:UP000053237};
RN [1] {ECO:0000313|EMBL:CCI50108.1, ECO:0000313|Proteomes:UP000053237}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ac Nc2 {ECO:0000313|EMBL:CCI50108.1,
RC ECO:0000313|Proteomes:UP000053237};
RA Gardiner A., Kemen E., Schultz-Larsen T., MacLean D., Van Oosterhout C.,
RA Jones J.D.G.;
RT "Recombination and specialization in a pathogen metapopulation.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCI50108.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CAIX01000393; CCI50108.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A024GUQ7; -.
DR STRING; 65357.A0A024GUQ7; -.
DR InParanoid; A0A024GUQ7; -.
DR OrthoDB; 4825346at2759; -.
DR Proteomes; UP000053237; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12421; RRM1_PTBP1_hnRNPL_like; 1.
DR CDD; cd12423; RRM3_PTBP1_like; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000053237};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 13..87
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 157..243
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 370..445
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 487..562
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 95..149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 304..347
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 565..626
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 95..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 116..142
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..327
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 565..582
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 584..626
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 626 AA; 70693 MW; A1254F29D0379AE6 CRC64;
MSKRARSSNP ESRVVFVHGL PQDCLESELL ALCCPFAVVE KSLLITQKSQ AFVQLPDVSS
ATNLINFYQT RDATIRGARI FFEYSNRSEI TTRAGFQDEH SIDQNHSHRS NRPNTRQEHS
SGYENMTKNQ HPSRSGDSGN GSTGRRGGYA GAPNTILMVT VTKIDYDVTV DVLQQVFQKF
GNVQKVVTFW KNEEFKALVQ MESIDQAQAA QQALDGRDIY TGCNTLGIVF SRHPELRVRF
NNDRSWDYMN PGLPPGPSVA DGNGPDINYD EGPMPGMLGD VPNSQGRGGS GVYGPRNDFT
DEHEGYMEGP RFDSRGPGPD RFDDDSFGHM PPGYSLPPHS TGRSLRPDKR RSPVLICSNM
DQKLVVCHRT LVLLLRLMRF HSQTPDRLFT FFGCFGDVVR VKIMFRKQDT ALIQFVDDFH
ATSALDHLDG VYLFNKKLRV DYSKHQNVSM PRGEVDLFEL ENTRDFSQSP LHRYRRRSPQ
EAVSPCPLLH ISGIPMELQR NQNALVELFQ PYGFVKNFHF IKQNNKMAII EMATMDEAVM
ALLCLDNLSY PDSHMRVSFS KTYFQPGMGN PPTSGNASRS HNRNGRSRSR DRDRDMSRAP
FSRDRGPGRG GRGDSDGGFR RYGGRY
//
