ID A0A024TRF9_9STRA Unreviewed; 256 AA.
AC A0A024TRF9;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=Ku domain-containing protein {ECO:0000259|Pfam:PF02735};
GN ORFNames=H310_10290 {ECO:0000313|EMBL:ETV96589.1};
OS Aphanomyces invadans.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales; Saprolegniaceae;
OC Aphanomyces.
OX NCBI_TaxID=157072 {ECO:0000313|EMBL:ETV96589.1};
RN [1] {ECO:0000313|EMBL:ETV96589.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NJM9701 {ECO:0000313|EMBL:ETV96589.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., van West P., Dieguez-Uribeondo J., Young S.K., Zeng Q.,
RA Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L., Chapman S.B.,
RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C., Pearson M.,
RA Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S., Wortman J.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Aphanomyces invadans NJM9701.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KI913976; ETV96589.1; -; Genomic_DNA.
DR RefSeq; XP_008874852.1; XM_008876630.1.
DR AlphaFoldDB; A0A024TRF9; -.
DR STRING; 157072.A0A024TRF9; -.
DR EnsemblFungi; H310_10290-t26_1; H310_10290-t26_1-p1; H310_10290.
DR EnsemblProtists; ETV96589; ETV96589; H310_10290.
DR GeneID; 20087340; -.
DR VEuPathDB; FungiDB:H310_10290; -.
DR eggNOG; KOG2326; Eukaryota.
DR OrthoDB; 5884at2759; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:InterPro.
DR Gene3D; 2.40.290.10; -; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR006164; Ku70/Ku80_beta-barrel_dom.
DR InterPro; IPR016194; SPOC-like_C_dom_sf.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR12604; KU AUTOANTIGEN DNA HELICASE; 1.
DR PANTHER; PTHR12604:SF4; X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5; 1.
DR Pfam; PF02735; Ku; 1.
DR SUPFAM; SSF100939; SPOC domain-like; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT DOMAIN 159..253
FT /note="Ku"
FT /evidence="ECO:0000259|Pfam:PF02735"
SQ SEQUENCE 256 AA; 28707 MW; 90CA1C9106148B2C CRC64;
MEAASVETPA DVLDGIIVAL DLVIRRTDNK KYDKRLVVIT DAATRINNPS DMEVVCTMIQ
NLEVHLQIMS FDFILTNHFY CSGIDFGMDT KHEQPDGVKD EAVAASFIKS ENEKMLHSIA
TEVQGEVQSV SKRMDFLAQS KLKPVLQTTK MRGSLEFGEN LFIPVYVFGK VLEATIPSLQ
KESQVAKKSS TFSEDDVPGK VRMERSYFAT AQPDEELPPE RRIKAYKYGS EMIPFSTADQ
AALKLLTTRG LKMVWA
//