ID A0A026WW70_OOCBI Unreviewed; 650 AA.
AC A0A026WW70;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=RNA polymerase II elongation factor ELL {ECO:0000313|EMBL:EZA60325.1};
GN ORFNames=X777_13414 {ECO:0000313|EMBL:EZA60325.1};
OS Ooceraea biroi (Clonal raider ant) (Cerapachys biroi).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Dorylinae; Ooceraea.
OX NCBI_TaxID=2015173 {ECO:0000313|EMBL:EZA60325.1, ECO:0000313|Proteomes:UP000053097};
RN [1] {ECO:0000313|EMBL:EZA60325.1, ECO:0000313|Proteomes:UP000053097}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24508170; DOI=10.1016/j.cub.2014.01.018;
RA Oxley P.R., Ji L., Fetter-Pruneda I., McKenzie S.K., Li C., Hu H.,
RA Zhang G., Kronauer D.J.;
RT "The genome of the clonal raider ant Cerapachys biroi.";
RL Curr. Biol. 24:451-458(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the ELL/occludin family.
CC {ECO:0000256|ARBA:ARBA00009171}.
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DR EMBL; KK107078; EZA60325.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A026WW70; -.
DR STRING; 2015173.A0A026WW70; -.
DR OMA; CQPQNSG; -.
DR Proteomes; UP000053097; Unassembled WGS sequence.
DR GO; GO:0008023; C:transcription elongation factor complex; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR Gene3D; 6.10.140.340; -; 1.
DR Gene3D; 1.10.10.2670; E3 ubiquitin-protein ligase; 1.
DR InterPro; IPR042065; E3_ELL-like.
DR InterPro; IPR031176; ELL/occludin.
DR InterPro; IPR019464; ELL_N.
DR InterPro; IPR010844; Occludin_ELL.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR23288; OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL; 1.
DR PANTHER; PTHR23288:SF17; RNA POLYMERASE II ELONGATION FACTOR ELL; 1.
DR Pfam; PF10390; ELL; 2.
DR Pfam; PF07303; Occludin_ELL; 1.
DR SUPFAM; SSF144292; occludin/ELL-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW Elongation factor {ECO:0000313|EMBL:EZA60325.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:EZA60325.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000053097};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..82
FT /note="RNA polymerase II elongation factor ELL N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10390"
FT DOMAIN 111..321
FT /note="RNA polymerase II elongation factor ELL N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10390"
FT DOMAIN 508..609
FT /note="OCEL"
FT /evidence="ECO:0000259|Pfam:PF07303"
FT REGION 195..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 313..478
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..224
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..343
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 360..412
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..449
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..478
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 650 AA; 73304 MW; E8B1B93284705D42 CRC64;
MALVPGVQYG LSSRDKFDQN NCLIFTKLTD SSFRAIQNYV KNRKFIIPSG QGHGSAVFTF
SLSSNQDMEG PQGGFECVQQ IGPNPAIPLE LYAGTLIRTL GRMNQPLSRF SRFRRSLEGL
GAIPYRMRIQ ANDEVYETTR YRMAVAEENS KNKCTRVIKA NGPDIGRKVK VKGTGRTIPP
PSSSYVRGYR ELTSIPAASN SQPRTSTNKP AVNSSSNNHS TTTRTPEKKI SDLMRRPLKE
RLIHVLALRP YKKPELYDRI NKEGLRERER PVMITILKQV AYMRDNTYHL HRHIWNDVQE
DWPFYTEQEK AVLKRRKPQN LTPPGSSDGA YSSGQSPNSI HAGSPPAITA PPPSLLNNKR
PGYHQANSDV LRGTTGNSVA AITSTSRSSC QISSPNDNGR SSHHQSGNRR DGVATGASGA
GGPSDTNADR RDRSDRSRGM REDRESRNRS SFASNAATYS SRASTSAVPA TYAGSSSNIT
AMTSPRMEVF EMPWSPDPLV CRDYLTNYTT ITSVEQKRRY KDDFIADYGD YRTLHSEVVV
IAKRFKELYE EYQKQVSLGN EVEQETISKQ MVYEYWKIKK DKELMQRRNR FNYLHAKLDH
IKQLLAAFEV EERANQAAMR VNKDMLALAY DTPMNPDSTV NTKGIDNRYY
//
