ID A0A059B7F5_EUCGR Unreviewed; 1094 AA.
AC A0A059B7F5;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUGRSUZ_H04822 {ECO:0000313|EMBL:KCW62162.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW62162.1};
RN [1] {ECO:0000313|EMBL:KCW62162.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW62162.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the DDB1 family.
CC {ECO:0000256|ARBA:ARBA00007453}.
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DR EMBL; KK198760; KCW62162.1; -; Genomic_DNA.
DR RefSeq; XP_010025491.1; XM_010027189.2.
DR AlphaFoldDB; A0A059B7F5; -.
DR STRING; 71139.A0A059B7F5; -.
DR EnsemblPlants; KCW62162; KCW62162; EUGRSUZ_H04822.
DR GeneID; 104415814; -.
DR Gramene; KCW62162; KCW62162; EUGRSUZ_H04822.
DR KEGG; egr:104415814; -.
DR eggNOG; KOG1897; Eukaryota.
DR InParanoid; A0A059B7F5; -.
DR OMA; HQDFLMR; -.
DR OrthoDB; 226997at2759; -.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 1.10.150.910; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR Pfam; PF03178; CPSF_A; 1.
DR Pfam; PF10433; MMS1_N; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 3: Inferred from homology;
FT DOMAIN 76..542
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT DOMAIN 751..1063
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03178"
SQ SEQUENCE 1094 AA; 122256 MW; 6BB6265DFDE067B3 CRC64;
MSVWNYVVTA HKPTNVTHSC VGNFTGPQEL NLIIAKCTRI EIHLLTPQGL QAMLDVPIYG
RIATLELFRP HGEAQDFLFI ATERYKFCVL QWDAETSELV TRAMGDVSDR IGRPTDNGQI
GIIDPDCRLI GLHLYDGLFK VIPFDNKGQL KEAFNIRLEE LQVLDIKFLY GCSKPTIVVL
YQDNKDARHV KTYEVALKDK DFVEGPWSQN NVDNGADLLI PVPPPLCGVL IIGEETIVYC
SANAFKAIPI RPSITKAYGR VDADGSRYLL GDHAGLLHLL VITHEKEKVT GHRVTGLKIE
LLGETSIAST ISYLDNAFVF IGSSYGDSQL IKLNLQPDSK GSYVEVLERY VNLGPIVDFS
VVDLERQGQG QVVTCSGAYK DGSLRIVRNG IGINEQASVE LQGIKGMWSL RSSIDDTYDT
FLVVSFISET RILAMNLEDE LEETEIEGFC SQVQTLFCHD AVHNQLVQVT SSSVRLVSSM
TRELRNEWHS PQGYSINVAT ANATQVLLAT GGGNLVYLEI GDGILKEIKH VQLEYEISCL
DINPIGENLH YSQLAAVGMW TDISIRIFSL PDLNLITKEN LGGEIIPRSV LLCAFEGISY
LLCALGDGHL LNFQLNMHSG ELTDRKKVSL GTQPITLRTF SSKNTTHVFA ASDRPTVIYS
SNKKLLYSNV NLKEVSHMCQ FNSAAFPDSL AIAKEGELTI GTIDDIQKLH IRSIPLGEHA
RRICHQEQSR TFAICSMKYN QSSAEESEVH FVRLLDDQTF EFMSTYPLDP FEHGCSILSC
SFSDDSSVYY CVGTAYVLPE ENEPTKGRIL VFIVEDGKLQ LIAEKETKGA VYSLNAFNGK
LLAAINQKIQ LYKWMLRDDG SRELQSECGH HGHILALYVQ TRGDFIVVGD LMKSISLLIY
KHEEGAIEER ARDYNANWMS AVEILDDDTY LGAENNFNLF TVRKNSEGAT DEERGRLEVV
GEYHLGEFVN RFRHGSLVMR LPDSDVGQIP TIIFGTVNGV IGVIASLPHD QYVFLEKLQS
NLRKVIKGVG GLSHEQWRSF YNEKKTVDAR NFLDGDLIES FLDLSRGRMD EISKAMVVSV
EELCKRVEEL TRLH
//
