ID A0A059BHI9_EUCGR Unreviewed; 1198 AA.
AC A0A059BHI9;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
GN ORFNames=EUGRSUZ_G02792 {ECO:0000313|EMBL:KCW65351.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW65351.1};
RN [1] {ECO:0000313|EMBL:KCW65351.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW65351.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; KK198759; KCW65351.1; -; Genomic_DNA.
DR RefSeq; XP_010067250.1; XM_010068948.2.
DR AlphaFoldDB; A0A059BHI9; -.
DR EnsemblPlants; KCW65351; KCW65351; EUGRSUZ_G02792.
DR GeneID; 104454177; -.
DR Gramene; KCW65351; KCW65351; EUGRSUZ_G02792.
DR KEGG; egr:104454177; -.
DR eggNOG; KOG2051; Eukaryota.
DR OrthoDB; 276824at2759; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR Gene3D; 1.25.40.180; -; 3.
DR Gene3D; 4.10.80.160; -; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR InterPro; IPR039762; Nmd2/UPF2.
DR InterPro; IPR007193; Upf2/Nmd2_C.
DR PANTHER; PTHR12839; NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2; 1.
DR PANTHER; PTHR12839:SF7; REGULATOR OF NONSENSE TRANSCRIPTS 2; 1.
DR Pfam; PF02854; MIF4G; 3.
DR Pfam; PF04050; Upf2; 1.
DR SMART; SM00543; MIF4G; 3.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490}.
FT DOMAIN 62..284
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT DOMAIN 480..668
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT DOMAIN 683..884
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 316..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 383..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 909..1022
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1057..1083
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1098..1118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1164..1198
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 384..401
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 425..464
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 909..927
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 943..957
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 969..998
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 999..1022
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1059..1083
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1198 AA; 135734 MW; 17246C71EF32934F CRC64;
MDSNEGESRS GGEQHGKQDD EENVARQEEL KKSIDAKMAL RQSNLNPERP DSSFLRTLDS
SIKRNTAVIK KLKQINEEQR EGLMDELRGV NLSKFVSEAV TAICDAKLRS SDIQAAVQIC
SLLHQRYKDF SPSLIQGLLK IFFPGKSADD SDADRNLKAM KKRSTLKLLL ELYFVGVIED
GGIFINIIKD LTSLEHLRDR DTTQSNLALL ASFARQGRIF LGLPLTGQEI YEEFYKGLNI
TAEQKKIFRK AVHAYYESAG ELLQSEHAAL RQMEHENAKI LNAKGELSDE NVSSYEKLRK
SYDHLYRNIS SLAESLDMQP PVMPEDGHTT RMTSGEDASS PAAKDSSTAE ALWDDEDTRA
FYECLPDLRA FVPAVLLGEV EPKVNEQSTK TQDQPTESAT DPERGQVIAE ERLEISVEPG
SSQEGKVFEK GKDKEEKDKE EKDKEKTKDM DKEKGKEKEV EKKVESEKEK VKGLEGTSLD
ALLQRLPGCV GRDLIDQLTV EFCYVNSKSN RKRLVRALFN VPRTSLELLP YYSRMVATLS
TCMKDVSAML LQMLEEEFNF LINKKDQMNI ETKIRNIRFI GELCKFRIAP AGLVFSCLKA
CLDDFTHHNI DVACNLLETC GRFLYRSPET TVRMANMLEI LMRLKNVKNL DPRHSTLVEN
AYYLCKPPER SARVAKVRPP LHQYIRKLLF SDLDKSSIEH VLRQLRKLPW SECEAYLLKC
FMKVHRGKYG QIHLIASLTA GLSRYHDEFA VAVVDEVLEE IHLGLELNDY GMQQRRVAHM
RFLGELYNYE HVDSSVIFET LHLILVFGHG TTEQDVLDPP EDCFRIRLVI TLLQTCGHYF
DRGSSKRKLD RFLMHFQRYI LGKGGLPLDV EFDLQDLFAD LRPNMTRYSS IEEVNAALLE
LEEHERTAFS EKASSEKHSD AEKVAGKSKH ANSANGRNIE NGGEENGEVH EDIADSDTDS
GSGSMDAGRD EEELDDDNPD DGCDSDDDED EDDDARGSAS DEDEVHVRQK VTEVDPLEEA
NFEEELKAVL QESLEQRRLE LRGRPTINMM IPMSVFEGST KDHHGRGLGG ESGDEAVDEE
GGARKEVQVK VLVKRGNKQQ TKQMYIPRDS SLVQSTKQKE AAELEEKQDI KRLVLEYNDR
EEEELNGLGN QSLNWSQSGA GRVISRGNNW EAGGGRTVGT RHRHLNYPGG GGYYSRKR
//
