ID A0A059BT21_EUCGR Unreviewed; 790 AA.
AC A0A059BT21;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=EUGRSUZ_F02760 {ECO:0000313|EMBL:KCW69257.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW69257.1};
RN [1] {ECO:0000313|EMBL:KCW69257.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW69257.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX54/DBP10
CC subfamily. {ECO:0000256|ARBA:ARBA00010379}.
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DR EMBL; KK198758; KCW69257.1; -; Genomic_DNA.
DR RefSeq; XP_010062183.1; XM_010063881.1.
DR AlphaFoldDB; A0A059BT21; -.
DR EnsemblPlants; KCW69257; KCW69257; EUGRSUZ_F02760.
DR Gramene; KCW69257; KCW69257; EUGRSUZ_F02760.
DR OrthoDB; 5475716at2759; -.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17959; DEADc_DDX54; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR012541; DBP10_C.
DR InterPro; IPR033517; DDX54/DBP10_DEAD-box_helicase.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR PANTHER; PTHR47959:SF8; RNA HELICASE; 1.
DR Pfam; PF08147; DBP10CT; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM01123; DBP10CT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 28..56
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 59..232
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 256..405
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 558..592
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 698..790
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 28..56
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 11..26
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..592
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 750..771
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 772..790
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 790 AA; 88951 MW; 3D720CC648AB1552 CRC64;
MAGGVHPYVS SKAELKRREQ QRKKARSGGF ESLGLSPDVF RGVKRKGYRV PTPIQRKTMP
LILSGADVVA MARTGSGKTA AFLVPMLERL KQHLPQGGVR ALILSPTRDL ALQTLKFTKE
LGRFTDLRTS LLVGGDSMES QFEELAQNPD IIIATPGRLM HHLSEVDDMT LRTVEYVVFD
EADCLFGMGF AEQLHKILSQ LSENRQTLLF SATLPSALAE FAKAGLRDPQ LVRLDLETRI
SPDLKLAFFT LRQEEKHAAL LYLIREQISS DQQTLIFVST KHHVEFLNSL FREEGIEPSV
CYGDMDQDAR KIHVSRFRSR KTMLLIVTDV AARGIDIPLL DNVINWDFPP KPKIFVHRVG
RAARAGRTGT AYSFMTTEDM AYLLDLHLFL SKPIWPAPTE DEVLKDMDGV MSKIDQAIAN
GETVYGRFPQ TVIDLVSDRV REIIDSSAEL YALQKTCTNA FRLYSKTKPS PSKESIRRVK
DLPREGLHPL FRNVLAGGEL VALAFSERLK TFRPKQTILE AEGEAAKSKH VQGPSCQWVD
VMKKKRAIHD GIINLVQQQK HDSKPSEEVE INPVSTSSKE KETKARGSKR KSRNFKDDEY
YISSIPTNHH MESGLAVRAN EGFGSNRLES AVLDLVADDS GGIRKQRSSY HWDKRSKKYV
KLNNGERVTA SGKIKTESGA KVKANKTGIY KKWKERSHSK ISLKGTSNEE NSVESAGMAG
DRKFQRTNRK FKGGYKQRSL PNANIRSEIK NLEQVRKERQ KKADRISYMK SKSAKSKKLG
KNGKKRKGKK
//
