ID A0A059CLY9_EUCGR Unreviewed; 324 AA.
AC A0A059CLY9;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
GN ORFNames=EUGRSUZ_C00847 {ECO:0000313|EMBL:KCW79458.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW79458.1};
RN [1] {ECO:0000313|EMBL:KCW79458.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW79458.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KK198755; KCW79458.1; -; Genomic_DNA.
DR RefSeq; XP_010047522.1; XM_010049220.2.
DR AlphaFoldDB; A0A059CLY9; -.
DR STRING; 71139.A0A059CLY9; -.
DR EnsemblPlants; KCW79458; KCW79458; EUGRSUZ_C00847.
DR GeneID; 104436446; -.
DR Gramene; KCW79458; KCW79458; EUGRSUZ_C00847.
DR KEGG; egr:104436446; -.
DR eggNOG; KOG2186; Eukaryota.
DR InParanoid; A0A059CLY9; -.
DR OMA; GDDYKEH; -.
DR OrthoDB; 5490568at2759; -.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 3.30.1490.490; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR039999; LYAR.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR014898; Znf_C2H2_LYAR.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR13100:SF10; CELL GROWTH-REGULATING NUCLEOLAR PROTEIN; 1.
DR PANTHER; PTHR13100; CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR; 1.
DR Pfam; PF08790; zf-LYAR; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 3.
DR PROSITE; PS51804; ZF_C2HC_LYAR; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU01145}.
FT DOMAIN 92..126
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 55..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 115..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..147
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 152..170
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 180..209
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 324 AA; 35971 MW; 5F40FC2AD2189673 CRC64;
MVWFQCEDCG ENLKKPKLPN HFRVCSAFKL SCIDCGETFS QQSVQGHTQC ISEAEKYGPK
GQGKVSNGTP AKPGKDAKQQ PDFDITVGLT KRPPWFCSLC NTKATSEQAL LLHAEGKKHK
AKARAFHASK QQPQQKQEST SPATLPPEEA SKSRGGDGEH IEEPKIKDIS TSNNAHDNSE
VDKGNLRSSK KRKHDGSDKI DHKKKTMLDK LNEVGDGEVI QAENTEVKKS KHVVTARENA
EDASHPNEDA QKKIKWKKLI KSTLKSNPDG KMKMKKLKKL VMEALKQSGV TEDENQLGAK
LERKINSSSR FAIDSKYVRL VASD
//
