ID A0A059CSG9_EUCGR Unreviewed; 312 AA.
AC A0A059CSG9;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=RNA-dependent RNA polymerase {ECO:0000256|RuleBase:RU363098};
DE EC=2.7.7.48 {ECO:0000256|RuleBase:RU363098};
GN ORFNames=EUGRSUZ_C02534 {ECO:0000313|EMBL:KCW81159.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW81159.1};
RN [1] {ECO:0000313|EMBL:KCW81159.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW81159.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probably involved in the RNA silencing pathway and required
CC for the generation of small interfering RNAs (siRNAs).
CC {ECO:0000256|RuleBase:RU363098}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000256|ARBA:ARBA00024517,
CC ECO:0000256|RuleBase:RU363098};
CC -!- SIMILARITY: Belongs to the RdRP family. {ECO:0000256|ARBA:ARBA00005762,
CC ECO:0000256|RuleBase:RU363098}.
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DR EMBL; KK198755; KCW81159.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A059CSG9; -.
DR STRING; 71139.A0A059CSG9; -.
DR EnsemblPlants; KCW81159; KCW81159; EUGRSUZ_C02534.
DR Gramene; KCW81159; KCW81159; EUGRSUZ_C02534.
DR InParanoid; A0A059CSG9; -.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR CDD; cd14686; bZIP; 1.
DR InterPro; IPR006712; HD-ZIP_N.
DR InterPro; IPR003106; Leu_zip_homeo.
DR InterPro; IPR007855; RNA-dep_RNA_pol_euk-typ.
DR PANTHER; PTHR45714:SF11; HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4; 1.
DR PANTHER; PTHR45714; HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14; 1.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF04618; HD-ZIP_N; 1.
DR Pfam; PF05183; RdRP; 1.
DR SMART; SM00340; HALZ; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotidyltransferase {ECO:0000256|RuleBase:RU363098};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU363098};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484,
KW ECO:0000256|RuleBase:RU363098};
KW RNA-mediated gene silencing {ECO:0000256|RuleBase:RU363098};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU363098}.
FT DOMAIN 186..229
FT /note="Leucine zipper homeobox-associated"
FT /evidence="ECO:0000259|SMART:SM00340"
FT REGION 108..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 192..222
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 120..157
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 312 AA; 34394 MW; 38F2261AAF0642A4 CRC64;
MIKVEKDPKL SDIRTVDALK IVQTSNKPKP AYLSKILIAL LSYGGVPNEF LLDMVENALG
DANSVFSSKR AAPRETNSKT RPFFGGVGVN RDILDILVVD LDDDNHVSSP NSTVLSISGK
RSERDPHGEN EVEAERTSCS CESIEEDGSG GDGARKKLRL SREQSLVLEE TFKEHNTLNP
CRTKTKQTEV DCEYLKRCCD NLTQENKRLQ KEVQELRALK LSPQLYMHMN PPTTLTMCPS
CQRVSVPSTS LSPPSSSSVT ASVIGLIGPV HKGANSNVSV LFLFQGTETK KVFLFRGTIF
EQKNAFGNVC SR
//
