ID A0A060SUZ0_PYCCI Unreviewed; 575 AA.
AC A0A060SUZ0;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Gypsy retrotransposon integrase-like protein 1 {ECO:0000256|ARBA:ARBA00039658};
GN ORFNames=BN946_scf184891.g2 {ECO:0000313|EMBL:CDO76039.1};
OS Pycnoporus cinnabarinus (Cinnabar-red polypore) (Trametes cinnabarina).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Polyporales; Polyporaceae; Trametes.
OX NCBI_TaxID=5643 {ECO:0000313|EMBL:CDO76039.1, ECO:0000313|Proteomes:UP000029665};
RN [1] {ECO:0000313|EMBL:CDO76039.1, ECO:0000313|Proteomes:UP000029665}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BRFM137 {ECO:0000313|EMBL:CDO76039.1,
RC ECO:0000313|Proteomes:UP000029665};
RA Levasseur A., Lomascolo A., Ruiz-Duenas F.J., Uzan E., Piumi F., Kues U.,
RA Ram A.F.J., Murat C., Haon M., Benoit I., Arfi Y., Chevret D., Drula E.,
RA Kwon M.J., Gouret P., Lesage-Meessen L., Lombard V., Mariette J.,
RA Noirot C., Park J., Patyshakuliyeva A., Wieneger R.A.B., Wosten H.A.B.,
RA Martin F., Coutinho P.M., de Vries R., Martinez A.T., Klopp C.,
RA Pontarotti P., Henrissat B., Record E.;
RT "The genome of the white-rot fungus Pycnoporus cinnabarinus: a
RT basidiomycete model with a versatile arsenal for lignocellulosic biomass
RT breakdown.";
RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDO76039.1}.
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DR EMBL; CCBP010000326; CDO76039.1; -; Genomic_DNA.
DR STRING; 5643.A0A060SUZ0; -.
DR HOGENOM; CLU_474182_0_0_1; -.
DR OrthoDB; 1544542at2759; -.
DR Proteomes; UP000029665; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47266; ENDONUCLEASE-RELATED; 1.
DR PANTHER; PTHR47266:SF28; TRANSPOSON TF2-1 POLYPROTEIN-RELATED; 1.
DR Pfam; PF00385; Chromo; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029665};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 287..381
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 520..575
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 36..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..77
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 575 AA; 65164 MW; 04C0E9AD06BF4E96 CRC64;
MHKQSFKPIK ESTKWPNQTH LPSWLPSLHY PSVFPPSTTL TPSSTIPRSR RSRRNHHHNP
QYQNPARQQT QPHVSDQQLL DQLIPNLSTI LGQSPTYDHL PHLPTSSFGN GTFADRVSWT
LVHPDLHCVV NQLLGLRVVG LSAWVDVYRS AADIVPALHL MRTFALAHPG TDHDFHWEVR
AVLDTTLICT HQLADLSLGK IVYQVLDYPA FHAILPKPPY VTTMQLNPAY DGPGQVDCLP
GALRHREEQA WDNLVSTHAP IASPNTANQQ WGLPSGNAXX XXXXXLPDRV ISDRGPQFVS
KAFQELNKLL GIQQSLSTAY HPQTDGQSER AIQELEVALR IYCGNYPDTW STLLPQFEFA
HNQRTHSVTG KSPFELLMGY QPRAIGMVHP RPKHPSTEER LTKLREWREN ALASHTKAAA
LMAKRRAAGN VTFKKGDKVF LESTNLSLPY PNRKLAPKRE GPFVIDQVMG PTTVKLRLPS
TWKIHPVFHT SLISHYRTTP EHGPNYVTPP PDVINGEEEW EIESTINHRK PARGGIQYLV
TWKGRPSHEN EWLREKDLKH AQTTLQTYKR KHKMA
//